Assignments of SCOP 1.65 structural domains to E. coli modules. GenProtEC December 7th, 2004. The modules are designated as bnumbers followed by an extension to indicate location in gene product. _1=N-terminal _2=C-terminal to _1 _3=C-terminal to _2 bnum module sf function b0002 b0002_1 53633 Carbamate kinase-like b0002 b0002_2 51735 NAD(P)-binding Rossmann-fold domains b0002 b0002_2 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain b0003 b0003 54211 Ribosomal protein S5 domain 2-like b0003 b0003 55060 GHMP Kinase, C-terminal domain b0004 b0004 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes b0008 b0008 51569 Aldolase b0009 b0009 53218 Molybdenum cofactor biosynthesis proteins b0014 b0014 53067 Actin-like ATPase domain b0014 b0014 56778 Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment b0015 b0015 46565 Chaperone J-domain b0015 b0015 48695 Multiheme cytochromes b0015 b0015 49493 HSP40/DnaJ peptide-binding domain b0016 b0016 53098 Ribonuclease H-like b0020 b0020 46785 Winged helix DNA-binding domain b0020 b0020 53850 Periplasmic binding protein-like II b0022 b0022 46689 Homeodomain-like b0023 b0023 46992 Ribosomal protein S20 b0025 b0025 52374 Nucleotidylyl transferase b0025 b0025 82114 Riboflavin kinase b0026 b0026 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases b0026 b0026 50677 ValRS/IleRS/LeuRS editing domain b0026 b0026 52374 Nucleotidylyl transferase b0028 b0028 54534 FKBP-like b0030 b0030 53590 Nucleoside hydrolase b0031 b0031 51735 NAD(P)-binding Rossmann-fold domains b0031 b0031 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain b0032 b0032 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain b0032 b0032 52317 Class I glutamine amidotransferase-like b0033 b0033 48108 Carbamoyl phosphate synthetase, large subunit connection domain b0033 b0033 52335 Methylglyoxal synthase-like b0033 b0033 52440 PreATP-grasp domain b0033 b0033 56059 Glutathione synthetase ATP-binding domain-like b0035 b0035 51161 Trimeric LpxA-like enzymes b0036 b0036 52096 ClpP/crotonase b0038 b0038 51735 NAD(P)-binding Rossmann-fold domains b0039 b0039 47203 Acyl-CoA dehydrogenase C-terminal domain-like b0039 b0039 56645 Acyl-CoA dehydrogenase NM domain-like b0041 b0041 52402 Adenine nucleotide alpha hydrolases-like b0042 b0042 52402 Adenine nucleotide alpha hydrolases-like b0042 b0042 52467 DHS-like NAD/FAD-binding domain b0043 b0043 51735 NAD(P)-binding Rossmann-fold domains b0043 b0043 51905 FAD/NAD(P)-binding domain b0044 b0044 54862 4Fe-4S ferredoxins b0046 b0046 52218 Flavoproteins b0047 b0047 51735 NAD(P)-binding Rossmann-fold domains b0048 b0048 53597 Dihydrofolate reductases b0049 b0049 56300 Metallo-dependent phosphatases b0051 b0051 53335 S-adenosyl-L-methionine-dependent methyltransferases b0053 b0053 54534 FKBP-like b0053 b0053 81827 Porin chaperone SurA, peptide-binding domain b0055 b0055 46565 Chaperone J-domain b0058 b0058 55120 Pseudouridine synthase b0059 b0059 52540 P-loop containing nucleoside triphosphate hydrolases b0060 b0060 53098 Ribonuclease H-like b0060 b0060 56672 DNA/RNA polymerases b0061 b0061 53639 AraD-like aldolase/epimerase b0062 b0062 52304 Type II 3-dehydroquinate dehydratase b0063 b0063 53067 Actin-like ATPase domain b0064 b0064 46689 Homeodomain-like b0064 b0064 51215 Regulatory protein AraC b0066 b0066 53795 PEP carboxykinase-like b0068 b0068 53850 Periplasmic binding protein-like II b0069 b0069 46785 Winged helix DNA-binding domain b0069 b0069 53850 Periplasmic binding protein-like II b0071 b0071 52016 Aconitase b0072 b0072 53732 Aconitase iron-sulfur domain b0074 b0074 51713 tRNA-guanine transglycosylase b0077 b0077 52467 DHS-like NAD/FAD-binding domain b0077 b0077 52518 Thiamin diphosphate-binding fold (THDP-binding) b0078 b0078 55021 Regulatory domain in the aminoacid metabolism b0080 b0080 47413 lambda repressor-like DNA-binding domains b0080 b0080 53822 Periplasmic binding protein-like I b0081 b0081 54742 Transcription-state regulator AbrB, the N-terminal DNA recognition domain b0082 b0082 53335 S-adenosyl-L-methionine-dependent methyltransferases b0082 b0082 81799 Putative methyltransferase TM0872, insert domain b0084 b0084 56519 Penicillin binding protein dimerisation domain b0084 b0084 56601 beta-lactamase/transpeptidase-like b0085 b0085 53244 MurD-like peptide ligases, peptide-binding domain b0085 b0085 53623 MurD-like peptide ligases, catalytic domain b0085 b0085 63418 MurE/MurF N-terminal domain b0086 b0086 53244 MurD-like peptide ligases, peptide-binding domain b0086 b0086 53623 MurD-like peptide ligases, catalytic domain b0086 b0086 63418 MurE/MurF N-terminal domain b0088 b0088 51984 MurCD N-terminal domain b0088 b0088 53244 MurD-like peptide ligases, peptide-binding domain b0088 b0088 53623 MurD-like peptide ligases, catalytic domain b0090 b0090 53756 UDP-Glycosyltransferase/glycogen phosphorylase b0091 b0091 51984 MurCD N-terminal domain b0091 b0091 53244 MurD-like peptide ligases, peptide-binding domain b0091 b0091 53623 MurD-like peptide ligases, catalytic domain b0092 b0092 52440 PreATP-grasp domain b0092 b0092 56059 Glutathione synthetase ATP-binding domain-like b0094 b0094 53067 Actin-like ATPase domain b0095 b0095 52490 Tubulin/Dihydroxyacetone kinase nucleotide-binding domain b0095 b0095 55307 Tubulin/Dihydroxyacetone kinase C-terminal domain b0098 b0098 52540 P-loop containing nucleoside triphosphate hydrolases b0098 b0098 81767 Pre-protein croslinking domain of SecA b0098 b0098 81886 Helical scaffold and wing domains of SecA b0099 b0099 55811 Nudix b0101 b0101 57716 Glucocorticoid receptor-like (DNA-binding domain) b0103 b0103 52540 P-loop containing nucleoside triphosphate hydrolases b0104 b0104 51412 Inosine monophosphate dehydrogenase (IMPDH) b0107 b0107 52540 P-loop containing nucleoside triphosphate hydrolases b0108 b0108 54523 Pili subunits b0109 b0109 51690 Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain b0109 b0109 54675 Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain b0110 b0110 55846 N-acetylmuramoyl-L-alanine amidase-like b0112 b0112 53187 Zn-dependent exopeptidases b0113 b0113 46785 Winged helix DNA-binding domain b0114 b0114 52518 Thiamin diphosphate-binding fold (THDP-binding) b0114 b0114 52922 TK C-terminal domain-like b0115 b0115 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex b0115 b0115 51230 Single hybrid motif b0115 b0115 52777 CoA-dependent acyltransferases b0116 b0116 51905 FAD/NAD(P)-binding domain b0116 b0116 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain b0118 b0118 52016 Aconitase b0118 b0118 53732 Aconitase iron-sulfur domain b0118 b0118 74778 Aconitase B, N-terminal domain b0121 b0121 53335 S-adenosyl-L-methionine-dependent methyltransferases b0123 b0123 49503 Cupredoxins b0124 b0124 50998 Quinoprotein alcohol dehydrogenase-like b0126 b0126 53056 beta-carbonic anhydrase, cab b0127 b0127 53795 PEP carboxykinase-like b0129 b0129 53062 IIA domain of mannose transporter, IIA-Man b0131 b0131 50692 ADC-like b0133 b0133 52374 Nucleotidylyl transferase b0134 b0134 51395 FMN-linked oxidoreductases b0135 b0135 49401 Bacterial adhesins b0136 b0136 49401 Bacterial adhesins b0137 b0137 49401 Bacterial adhesins b0140 b0140 49354 PapD-like b0140 b0140 49584 Periplasmic chaperone C-domain b0141 b0141 49401 Bacterial adhesins b0142 b0142 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK b0143 b0143 81301 Nucleotidyltransferase b0143 b0143 81891 tRNA CCA-adding enzyme, C-terminal domains b0144 b0144 52374 Nucleotidylyl transferase b0148 b0148 52540 P-loop containing nucleoside triphosphate hydrolases b0149 b0149_3 56601 beta-lactamase/transpeptidase-like b0150 b0150 56935 Porins b0151 b0151 53795 PEP carboxykinase-like b0152 b0152 53807 Helical backbone metal recepto b0153 b0153_1 81345 ABC transporter involved in vitamin B12 uptake, BtuC b0153 b0153_2 81345 ABC transporter involved in vitamin B12 uptake, BtuC b0154 b0154 53383 PLP-dependent transferases b0155 b0155 81340 Clc chloride channel b0158 b0158 53807 Helical backbone metal recepto b0159 b0159 53167 Purine and uridine phosphorylases b0161 b0161 50156 PDZ domain-like b0161 b0161 50494 Trypsin-like serine proteases b0164 b0164 56300 Metallo-dependent phosphatases b0166 b0166 51161 Trimeric LpxA-like enzymes b0167 b0167 55021 Regulatory domain in the aminoacid metabolism b0167 b0167 81301 Nucleotidyltransferase b0167 b0167 81891 tRNA CCA-adding enzyme, C-terminal domains b0168 b0168 55920 Creatinase/aminopeptidase b0169 b0169 52313 Ribosomal protein S2 b0170 b0170 46934 UBA-like b0170 b0170 54713 Elongation factor Ts (EF-Ts), dimerisation domain b0171 b0171 53633 Carbamate kinase-like b0172 b0172 55194 Ribosome recycling factor, RRF b0173 b0173 51735 NAD(P)-binding Rossmann-fold domains b0173 b0173 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain b0173 b0173 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain b0174 b0174 64005 Undecaprenyl diphosphate synthase b0176 b0176 50156 PDZ domain-like b0179 b0179 51161 Trimeric LpxA-like enzymes b0180 b0180 54637 Thioesterase/thiol ester dehydrase-isomerase b0181 b0181 51161 Trimeric LpxA-like enzymes b0182 b0182 53756 UDP-Glycosyltransferase/glycogen phosphorylase b0183 b0183 53098 Ribonuclease H-like b0184 b0184 50249 Nucleic acid-binding proteins b0185 b0185 52096 ClpP/crotonase b0186 b0186 53383 PLP-dependent transferases b0186 b0186 55904 Ornithine decarboxylase C-terminal domain b0188 b0188 52402 Adenine nucleotide alpha hydrolases-like b0188 b0188 82829 Putative cell cycle protein MesJ, middle and C-terminal domain b0191 b0191 75620 Polypeptide chain release factor 2 (RF2) b0192 b0192 50386 STI-like b0194 b0194 52954 Anticodon-binding domain of Class II aaRS b0194 b0194 55681 Class II aaRS and biotin synthetases b0194 b0194 55826 Hypothetical protein HI1434 (YbaK homologue) b0197 b0197 53850 Periplasmic binding protein-like II b0199 b0199 53795 PEP carboxykinase-like b0200 b0200 56784 HAD-like b0207 b0207 51430 NAD(P)-linked oxidoreductase b0208 b0208 46785 Winged helix DNA-binding domain b0208 b0208 53850 Periplasmic binding protein-like II b0209 b0209 56219 DNase I-like b0210 b0210 53335 S-adenosyl-L-methionine-dependent methyltransferases b0211 b0211 53955 Lysozyme-like b0211 b0211 54106 LysM domain b0212 b0212 56281 Metallo-hydrolase/oxidoreductase b0213 b0213 53335 S-adenosyl-L-methionine-dependent methyltransferases b0214 b0214 53098 Ribonuclease H-like b0215 b0215 53098 Ribonuclease H-like b0219 b0219 56317 Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase b0221 b0221 47203 Acyl-CoA dehydrogenase C-terminal domain-like b0221 b0221 56645 Acyl-CoA dehydrogenase NM domain-like b0222 b0222 53697 SIS domain b0223 b0223 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases) b0231 b0231 56672 DNA/RNA polymerases b0234 b0234 55729 Acyl-CoA N-acyltransferases (Nat) b0236 b0236 75620 Polypeptide chain release factor 2 (RF2) b0237 b0237 53187 Zn-dependent exopeptidases b0238 b0238 53271 PRTase-like b0239 b0239 53474 alpha/beta-Hydrolases b0241 b0241 56935 Porins b0242 b0242 53633 Carbamate kinase-like b0243 b0243 53720 ALDH-like b0254 b0254 46785 Winged helix DNA-binding domain b0254 b0254 53850 Periplasmic binding protein-like II b0255 b0255 46689 Homeodomain-like b0256 b0256 46689 Homeodomain-like b0256 b0256 53098 Ribonuclease H-like b0258 b0258 56672 DNA/RNA polymerases b0261 b0261 82282 Betaine-homocysteine S-methyltransferase b0262 b0262 52540 P-loop containing nucleoside triphosphate hydrolases b0262 b0262 53795 PEP carboxykinase-like b0265 b0265 46689 Homeodomain-like b0267 b0267 46689 Homeodomain-like b0267 b0267 53098 Ribonuclease H-like b0268 b0268 51569 Aldolase b0269 b0269 52218 Flavoproteins b0271 b0271 75005 alpha-L-arabinanase b0272 b0272 46785 Winged helix DNA-binding domain b0272 b0272 55781 GAF domain-like b0273 b0273 53671 Aspartate/ornithine carbamoyltransferase b0275 b0275 46689 Homeodomain-like b0278 b0278 46894 C-terminal effector domain of the bipartite response regulators b0278 b0278 53041 Resolvase-like b0281 b0281 56349 DNA breaking-rejoining enzymes b0282 b0282 53850 Periplasmic binding protein-like II b0284 b0284 54665 CO dehydrogenase molybdoprotein N-domain-like b0284 b0284 56003 Molybdemum cofactor-binding domain b0285 b0285 55447 CO dehydrogenase flavoprotein C-terminal domain-like b0285 b0285 56176 FAD-binding domain b0286 b0286 47741 CO dehydrogenase ISP C-domain like b0286 b0286 54292 2Fe-2S ferredoxin-like b0289 b0289 49354 PapD-like b0291 b0291 49482 Aromatic compound dioxygenase b0292 b0292 49354 PapD-like b0294 b0294 46894 C-terminal effector domain of the bipartite response regulators b0297 b0297 55124 Sulfite reductase, domains 1 and 3 b0299 b0299 53098 Ribonuclease H-like b0300 b0300 46689 Homeodomain-like b0300 b0300 55136 Probable bacterial effector-binding domain b0304 b0304 51905 FAD/NAD(P)-binding domain b0304 b0304 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain b0305 b0305 46689 Homeodomain-like b0305 b0305 51182 RmlC-like cupins b0306 b0306 53671 Aspartate/ornithine carbamoyltransferase b0307 b0307 46548 alpha-helical ferredoxin b0311 b0311 51905 FAD/NAD(P)-binding domain b0311 b0311 54373 FAD-linked reductases, C-terminal domain b0312 b0312 53720 ALDH-like b0315 b0315 46894 C-terminal effector domain of the bipartite response regulators b0316 b0316 46785 Winged helix DNA-binding domain b0316 b0316 53850 Periplasmic binding protein-like II b0318 b0318 48403 Ankyrin repeat b0319 b0319 51445 (Trans)glycosidases b0320 b0320 51735 NAD(P)-binding Rossmann-fold domains b0320 b0320 52210 Succinyl-CoA synthetase domains b0323 b0323 53633 Carbamate kinase-like b0324 b0324 51338 Composite domain of metallo-dependent hydrolases b0324 b0324 51556 Metallo-dependent hydrolases b0325 b0325 50129 GroES-like b0325 b0325 51735 NAD(P)-binding Rossmann-fold domains b0330 b0330 52540 P-loop containing nucleoside triphosphate hydrolases b0331 b0331 51621 Phosphoenolpyruvate/pyruvate domain b0333 b0333 48256 Citrate synthase b0335 b0335 56801 Acetyl-CoA synthetase-like b0337 b0337 51338 Composite domain of metallo-dependent hydrolases b0337 b0337 51556 Metallo-dependent hydrolases b0338 b0338 46785 Winged helix DNA-binding domain b0338 b0338 53850 Periplasmic binding protein-like II b0339 b0339 53056 beta-carbonic anhydrase, cab b0340 b0340 47413 lambda repressor-like DNA-binding domains b0340 b0340 55234 Cyanase C-terminal domain b0342 b0342 51161 Trimeric LpxA-like enzymes b0344 b0344 49303 beta-Galactosidase/glucuronidase domain b0344 b0344 49785 Galactose-binding domain-like b0344 b0344 51445 (Trans)glycosidases b0344 b0344 74650 Galactose mutarotase-like b0346 b0346 46785 Winged helix DNA-binding domain b0346 b0346 55781 GAF domain-like b0347 b0347 51735 NAD(P)-binding Rossmann-fold domains b0347 b0347 51905 FAD/NAD(P)-binding domain b0348 b0348 53213 LigB subunit of an aromatic-ring-opening dioxygenase LigAB b0350 b0350 56529 FAH b0351 b0351 51735 NAD(P)-binding Rossmann-fold domains b0352 b0352 51713 tRNA-guanine transglycosylase b0355 b0355 53474 alpha/beta-Hydrolases b0356 b0356 50129 GroES-like b0356 b0356 51735 NAD(P)-binding Rossmann-fold domains b0359 b0359 51161 Trimeric LpxA-like enzymes b0360 b0360 46689 Homeodomain-like b0361 b0361 53098 Ribonuclease H-like b0362 b0362 51161 Trimeric LpxA-like enzymes b0363 b0363 53448 Nucleotide-diphospho-sugar transferases b0365 b0365 53850 Periplasmic binding protein-like II b0366 b0366 53795 PEP carboxykinase-like b0368 b0368 51197 Clavaminate synthase-like b0372 b0372 53098 Ribonuclease H-like b0374 b0374 51126 Pectin lyase-like b0374 b0374 56925 OMPA-like b0375 b0375 46785 Winged helix DNA-binding domain b0375 b0375 51206 cAMP-binding domain-like b0376 b0376 56601 beta-lactamase/transpeptidase-like b0378 b0378 53955 Lysozyme-like b0381 b0381 52440 PreATP-grasp domain b0381 b0381 56059 Glutathione synthetase ATP-binding domain-like b0383 b0383 53649 Alkaline phosphatase-like b0385 b0385 55073 Adenylyl and guanylyl cyclase catalytic domain b0386 b0386 51735 NAD(P)-binding Rossmann-fold domains b0388 b0388 52540 P-loop containing nucleoside triphosphate hydrolases b0394 b0394 53067 Actin-like ATPase domain b0397 b0397 52540 P-loop containing nucleoside triphosphate hydrolases b0398 b0398 56300 Metallo-dependent phosphatases b0399 b0399 52172 CheY-like b0400 b0400 47384 Homodimeric domain of signal transducing histidine kinase b0400 b0400 55785 PYP-like sensor domain (PAS domain) b0400 b0400 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b0403 b0403 51011 Glycosyl hydrolase domain b0403 b0403 51445 (Trans)glycosidases b0403 b0403 81296 E set domains b0405 b0405 51197 Clavaminate synthase-like b0406 b0406 51713 tRNA-guanine transglycosylase b0408 b0408 82866 Multidrug efflux transporter AcrB transmembrane domain b0409 b0409 82866 Multidrug efflux transporter AcrB transmembrane domain b0414 b0414_1 53927 Cytidine deaminase-like b0414 b0414_2 53597 Dihydrofolate reductases b0415 b0415 52121 Lumazine synthase b0416 b0416 48013 Antitermination factor NusB b0417 b0417 55326 Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain b0417 b0417 56042 Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain b0419 b0419 51430 NAD(P)-linked oxidoreductase b0420 b0420 52518 Thiamin diphosphate-binding fold (THDP-binding) b0420 b0420 52922 TK C-terminal domain-like b0421 b0421 48576 Terpenoid synthases b0423 b0423 50249 Nucleic acid-binding proteins b0423 b0423 52402 Adenine nucleotide alpha hydrolases-like b0423 b0423 52821 Rhodanese/Cell cycle control phosphatase b0425 b0425 48179 6-phosphogluconate dehydrogenase C-terminal domain-like b0425 b0425 51735 NAD(P)-binding Rossmann-fold domains b0430 b0430 81452 Cytochrome c oxidase subunit III-like b0431 b0431 81442 Cytochrome c oxidase subunit I-like b0432 b0432 49503 Cupredoxins b0432 b0432 81464 Cytochrome c oxidase subunit II-like, transmembrane region b0436 b0436 54534 FKBP-like b0436 b0436 81827 Porin chaperone SurA, peptide-binding domain b0437 b0437 52096 ClpP/crotonase b0438 b0438 52540 P-loop containing nucleoside triphosphate hydrolases b0438 b0438 57716 Glucocorticoid receptor-like (DNA-binding domain) b0439 b0439 52540 P-loop containing nucleoside triphosphate hydrolases b0439 b0439 81296 E set domains b0440 b0440 47729 IHF-like DNA-binding proteins b0441 b0441 54534 FKBP-like b0441 b0441 81827 Porin chaperone SurA, peptide-binding domain b0442 b0442 47781 RuvA domain 2-like b0443 b0443 54637 Thioesterase/thiol ester dehydrase-isomerase b0444 b0444 52402 Adenine nucleotide alpha hydrolases-like b0445 b0445 46785 Winged helix DNA-binding domain b0445 b0445 53850 Periplasmic binding protein-like II b0446 b0446 56784 HAD-like b0448 b0448_2 52540 P-loop containing nucleoside triphosphate hydrolases b0449 b0449_2 52540 P-loop containing nucleoside triphosphate hydrolases b0450 b0450 54913 GlnB-like b0452 b0452 54637 Thioesterase/thiol ester dehydrase-isomerase b0454 b0454 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain b0459 b0459 51161 Trimeric LpxA-like enzymes b0460 b0460 68989 Hemolysin expression modulating protein HHA b0462 b0462 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains b0462 b0462 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains b0462 b0462 82866 Multidrug efflux transporter AcrB transmembrane domain b0463 b0463 51230 Single hybrid motif b0464 b0464 46689 Homeodomain-like b0465 b0465_2 50182 Sm-like ribonucleoproteins b0465 b0465_2 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain b0469 b0469 53271 PRTase-like b0470 b0470 48019 DNA polymerase III clamp loader subunits, C-terminal domain b0470 b0470 52540 P-loop containing nucleoside triphosphate hydrolases b0471 b0471 82607 YbaB-like b0472 b0472 56712 Prokaryotic type I DNA topoisomerase b0473 b0473 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b0474 b0474 52540 P-loop containing nucleoside triphosphate hydrolases b0474 b0474 57774 Microbial and mitochondrial ADK, insert zinc finger doma b0475 b0475 53800 Chelatase b0476 b0476 53474 alpha/beta-Hydrolases b0477 b0477 53613 Ribokinase-like b0478 b0478 51735 NAD(P)-binding Rossmann-fold domains b0480 b0480 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain b0480 b0480 56300 Metallo-dependent phosphatases b0481 b0481 55826 Hypothetical protein HI1434 (YbaK homologue) b0484 b0484 55008 Metal-binding domain b0484 b0484 56784 HAD-like b0484 b0484 81653 Calcium ATPase, transduction domain A b0484 b0484 81665 Calcium ATPase, transmembrane domain M b0485 b0485 56601 beta-lactamase/transpeptidase-like b0487 b0487 46955 Putative DNA-binding domain b0489 b0489 51197 Clavaminate synthase-like b0490 b0490 53795 PEP carboxykinase-like b0493 b0493 51735 NAD(P)-binding Rossmann-fold domains b0494 b0494 52266 SGHN hydrolase b0495 b0495 53795 PEP carboxykinase-like b0503 b0503 52540 P-loop containing nucleoside triphosphate hydrolases b0503 b0503 52821 Rhodanese/Cell cycle control phosphatase b0504 b0504 46785 Winged helix DNA-binding domain b0504 b0504 53850 Periplasmic binding protein-like II b0506 b0506 46785 Winged helix DNA-binding domain b0506 b0506 55781 GAF domain-like b0507 b0507 52467 DHS-like NAD/FAD-binding domain b0507 b0507 52518 Thiamin diphosphate-binding fold (THDP-binding) b0508 b0508 51658 Xylose isomerase-like b0509 b0509 51735 NAD(P)-binding Rossmann-fold domains b0509 b0509 51905 FAD/NAD(P)-binding domain b0512 b0512 51338 Composite domain of metallo-dependent hydrolases b0512 b0512 51556 Metallo-dependent hydrolases b0515 b0515 51182 RmlC-like cupins b0516 b0516 53187 Zn-dependent exopeptidases b0516 b0516 55031 Bacterial exopeptidase dimerisation domain b0518 b0518 51735 NAD(P)-binding Rossmann-fold domains b0518 b0518 52210 Succinyl-CoA synthetase domains b0521 b0521 53633 Carbamate kinase-like b0522 b0522 51246 Rudiment single hybrid motif b0522 b0522 52440 PreATP-grasp domain b0522 b0522 56059 Glutathione synthetase ATP-binding domain-like b0523 b0523 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) b0524 b0524 56300 Metallo-dependent phosphatases b0525 b0525 50891 Cyclophilin (peptidylprolyl isomerase) b0526 b0526 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases b0526 b0526 52374 Nucleotidylyl transferase b0528 b0528 55174 Alpha-L RNA-binding motif b0529 b0529 51735 NAD(P)-binding Rossmann-fold domains b0529 b0529 53223 Aminoacid dehydrogenase-like, N-terminal domain b0531 b0531 49354 PapD-like b0531 b0531 49584 Periplasmic chaperone C-domain b0533 b0533 49401 Bacterial adhesins b0534 b0534 49401 Bacterial adhesins b0535 b0535 52172 CheY-like b0537 b0537 56349 DNA breaking-rejoining enzymes b0539 b0539 52980 Restriction endonuclease-like b0541 b0541 53098 Ribonuclease H-like b0544 b0544 53041 Resolvase-like b0545 b0545 49777 PEBP-like b0546 b0546 46689 Homeodomain-like b0553 b0553 56935 Porins b0555 b0555 53955 Lysozyme-like b0560 b0560 46955 Putative DNA-binding domain b0562 b0562 53335 S-adenosyl-L-methionine-dependent methyltransferases b0564 b0564 46689 Homeodomain-like b0565 b0565 69917 OMPT-like b0566 b0566 46689 Homeodomain-like b0567 b0567 46626 Cytochrome c b0568 b0568 48452 TPR-like b0569 b0569 53448 Nucleotide-diphospho-sugar transferases b0570 b0570 47384 Homodimeric domain of signal transducing histidine kinase b0570 b0570 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b0571 b0571 52172 CheY-like b0572 b0572 56954 Integral outer membrane protein TolC, efflux pump component b0574 b0574 51230 Single hybrid motif b0575 b0575 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains b0575 b0575 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains b0575 b0575 82866 Multidrug efflux transporter AcrB transmembrane domain b0576 b0576 53187 Zn-dependent exopeptidases b0577 b0577 50182 Sm-like ribonucleoproteins b0577 b0577 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain b0578 b0578 55469 NADH oxidase/flavin reductase b0582 b0582 53098 Ribonuclease H-like b0583 b0583 56214 4'-phosphopantetheinyl transferase b0584 b0584 56935 Porins b0585 b0585 53474 alpha/beta-Hydrolases b0586 b0586 47336 ACP-like b0586 b0586 52777 CoA-dependent acyltransferases b0586 b0586 53474 alpha/beta-Hydrolases b0586 b0586 56801 Acetyl-CoA synthetase-like b0588 b0588 53795 PEP carboxykinase-like b0589 b0589 81345 ABC transporter involved in vitamin B12 uptake, BtuC b0590 b0590 81345 ABC transporter involved in vitamin B12 uptake, BtuC b0592 b0592 53807 Helical backbone metal recepto b0593 b0593 56322 ADC synthase b0594 b0594 56801 Acetyl-CoA synthetase-like b0595 b0595 47336 ACP-like b0595 b0595 52499 Cysteine hydrolase b0596 b0596 51735 NAD(P)-binding Rossmann-fold domains b0597 b0597 54637 Thioesterase/thiol ester dehydrase-isomerase b0599 b0599 56796 Dehydroquinate synthase-like b0600 b0600 53383 PLP-dependent transferases b0602 b0602 52402 Adenine nucleotide alpha hydrolases-like b0603 b0603 46785 Winged helix DNA-binding domain b0603 b0603 53850 Periplasmic binding protein-like II b0604 b0604 52833 Thioredoxin-like b0605 b0605 52833 Thioredoxin-like b0606 b0606 51905 FAD/NAD(P)-binding domain b0606 b0606 52833 Thioredoxin-like b0607 b0607 52402 Adenine nucleotide alpha hydrolases-like b0608 b0608 50129 GroES-like b0608 b0608 51735 NAD(P)-binding Rossmann-fold domains b0610 b0610 54534 FKBP-like b0611 b0611 55895 Ribonuclease Rh-like b0615 b0615 53316 CoA transferase b0619 b0619 54631 CBS-domain b0619 b0619 55890 Sporulation responce regulatory protein Spo0B b0620 b0620 52172 CheY-like b0622 b0622 56925 OMPA-like b0623 b0623 50249 Nucleic acid-binding proteins b0625 b0625 56317 Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase b0626 b0626 56317 Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase b0632 b0632 56601 beta-lactamase/transpeptidase-like b0632 b0632 69189 Penicillin-binding protein 5, C-terminal domain b0635 b0635 56519 Penicillin binding protein dimerisation domain b0635 b0635 56601 beta-lactamase/transpeptidase-like b0636 b0636 75217 alpha/beta knot b0638 b0638 53254 Phosphoglycerate mutase-like b0639 b0639 52374 Nucleotidylyl transferase b0640 b0640 48019 DNA polymerase III clamp loader subunits, C-terminal domain b0640 b0640 52540 P-loop containing nucleoside triphosphate hydrolases b0642 b0642 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases b0642 b0642 50677 ValRS/IleRS/LeuRS editing domain b0642 b0642 52374 Nucleotidylyl transferase b0643 b0643 57774 Microbial and mitochondrial ADK, insert zinc finger doma b0646 b0646 46565 Chaperone J-domain b0647 b0647 81901 Cysteine rich protein B (HcpB) b0649 b0649 46565 Chaperone J-domain b0650 b0650 53067 Actin-like ATPase domain b0650 b0650 56778 Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment b0651 b0651 53590 Nucleoside hydrolase b0652 b0652 53795 PEP carboxykinase-like b0655 b0655 53850 Periplasmic binding protein-like II b0657 b0657 56317 Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase b0658 b0658 54631 CBS-domain b0660 b0660 52540 P-loop containing nucleoside triphosphate hydrolases b0660 b0660 54791 Eukaryotic type KH-domain (KH-domain type I) b0662 b0662 51905 FAD/NAD(P)-binding domain b0674 b0674 52402 Adenine nucleotide alpha hydrolases-like b0674 b0674 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases) b0675 b0675 56784 HAD-like b0676 b0676 46785 Winged helix DNA-binding domain b0676 b0676 53067 Actin-like ATPase domain b0677 b0677 51338 Composite domain of metallo-dependent hydrolases b0677 b0677 51556 Metallo-dependent hydrolases b0678 b0678 52512 Phosphosugar isomerase b0679 b0679_2 55604 Glucose permease domain IIB b0679 b0679_3 51261 Duplicated hybrid motif b0680 b0680 50715 Ribosomal protein L25-like b0680 b0680 52374 Nucleotidylyl transferase b0681 b0681 56935 Porins b0683 b0683 46785 Winged helix DNA-binding domain b0684 b0684 52218 Flavoproteins b0686 b0686 53474 alpha/beta-Hydrolases b0687 b0687 82808 Replication modulator SeqA, C-terminal DNA-binding domain b0688 b0688 53738 Phosphoglucomutase, first 3 domains b0688 b0688 55957 Phosphoglucomutase, C-terminal domain b0693 b0693 52172 CheY-like b0693 b0693 53383 PLP-dependent transferases b0693 b0693 55904 Ornithine decarboxylase C-terminal domain b0694 b0694 52172 CheY-like b0695 b0695_1 52402 Adenine nucleotide alpha hydrolases-like b0695 b0695_1 52540 P-loop containing nucleoside triphosphate hydrolases b0695 b0695_2 47384 Homodimeric domain of signal transducing histidine kinase b0695 b0695_2 55781 GAF domain-like b0695 b0695_2 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b0697 b0697 56784 HAD-like b0697 b0697 81653 Calcium ATPase, transduction domain A b0697 b0697 81665 Calcium ATPase, transmembrane domain M b0708 b0708 48173 Cryptochrome/photolyase FAD-binding domain b0708 b0708 52425 Cryptochrome/photolyase, N-terminal domain b0714 b0714 46946 S13-like H2TH domain b0714 b0714 57716 Glucocorticoid receptor-like (DNA-binding domain) b0714 b0714 81624 N-terminal domain of MutM-like DNA repair proteins b0717 b0717 49354 PapD-like b0717 b0717 49584 Periplasmic chaperone C-domain b0719 b0719 49401 Bacterial adhesins b0720 b0720 48256 Citrate synthase b0721 b0721 81343 Fumarate reductase respiratory complex transmembrane subunits b0722 b0722 81343 Fumarate reductase respiratory complex transmembrane subunits b0723 b0723 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain b0723 b0723 51905 FAD/NAD(P)-binding domain b0723 b0723 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain b0724 b0724 46548 alpha-helical ferredoxin b0724 b0724 54292 2Fe-2S ferredoxin-like b0726 b0726 52518 Thiamin diphosphate-binding fold (THDP-binding) b0727 b0727 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex b0727 b0727 51230 Single hybrid motif b0727 b0727 52777 CoA-dependent acyltransferases b0728 b0728 52210 Succinyl-CoA synthetase domains b0728 b0728 56059 Glutathione synthetase ATP-binding domain-like b0729 b0729 51735 NAD(P)-binding Rossmann-fold domains b0729 b0729 52210 Succinyl-CoA synthetase domains b0730 b0730 46785 Winged helix DNA-binding domain b0731 b0731_1 55804 Phoshotransferase/anion transport protein b0732 b0732 69898 b0736 b0736 54637 Thioesterase/thiol ester dehydrase-isomerase b0739 b0739 74653 TolA/TonB C-terminal domain b0740 b0740 50960 TolB, C-terminal domain b0740 b0740 52964 TolB, N-terminal domain b0742 b0742 48452 TPR-like b0754 b0754 51569 Aldolase b0755 b0755 53254 Phosphoglycerate mutase-like b0756 b0756 74650 Galactose mutarotase-like b0757 b0757 54211 Ribosomal protein S5 domain 2-like b0757 b0757 55060 GHMP Kinase, C-terminal domain b0758 b0758 54197 HIT-like b0760 b0760_2 52540 P-loop containing nucleoside triphosphate hydrolases b0761 b0761 46785 Winged helix DNA-binding domain b0761 b0761 50331 MOP-like b0763 b0763 53850 Periplasmic binding protein-like II b0765 b0765 50331 MOP-like b0765 b0765 53795 PEP carboxykinase-like b0766 b0766 56784 HAD-like b0767 b0767 50974 Nitrous oxide reductase, N-terminal domain b0771 b0771 52016 Aconitase b0771 b0771 53732 Aconitase iron-sulfur domain b0772 b0772 51126 Pectin lyase-like b0773 b0773 49777 PEBP-like b0774 b0774 53383 PLP-dependent transferases b0775 b0775 51445 (Trans)glycosidases b0776 b0776 53383 PLP-dependent transferases b0777 b0777 53335 S-adenosyl-L-methionine-dependent methyltransferases b0778 b0778 52540 P-loop containing nucleoside triphosphate hydrolases b0779 b0779 46600 C-terminal UvrC-binding domain of UvrB b0779 b0779 52540 P-loop containing nucleoside triphosphate hydrolases b0782 b0782 53218 Molybdenum cofactor biosynthesis proteins b0783 b0783 55040 Molybdenum cofactor biosynthesis protein C, MoaC b0784 b0784 54285 MoaD/ThiS b0785 b0785 54690 Molybdopterin synthase subunit MoaE b0789 b0789 56024 Phospholipase D/nuclease b0790 b0790 56219 DNase I-like b0795 b0795 51230 Single hybrid motif b0796 b0796 46689 Homeodomain-like b0797 b0797 52540 P-loop containing nucleoside triphosphate hydrolases b0799 b0799 52540 P-loop containing nucleoside triphosphate hydrolases b0800 b0800 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain b0800 b0800 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain b0805 b0805 56935 Porins b0807 b0807 53335 S-adenosyl-L-methionine-dependent methyltransferases b0809 b0809 53795 PEP carboxykinase-like b0811 b0811 53850 Periplasmic binding protein-like II b0812 b0812 47240 Ferritin-like b0814 b0814 56925 OMPA-like b0815 b0815 53649 Alkaline phosphatase-like b0817 b0817 46785 Winged helix DNA-binding domain b0817 b0817 47979 Iron-dependent represor protein, dimerization domain b0820 b0820_1 52540 P-loop containing nucleoside triphosphate hydrolases b0820 b0820_2 52540 P-loop containing nucleoside triphosphate hydrolases b0822 b0822 56784 HAD-like b0823 b0823 51998 PFL-like glycyl radical enzymes b0824 b0824 54862 4Fe-4S ferredoxins b0826 b0826 69572 Activating enzymes of the ubiquitin-like proteins b0827 b0827 53218 Molybdenum cofactor biosynthesis proteins b0827 b0827 63882 Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains b0828 b0828 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases) b0829 b0829_2 52540 P-loop containing nucleoside triphosphate hydrolases b0830 b0830 53850 Periplasmic binding protein-like II b0833 b0833 51412 Inosine monophosphate dehydrogenase (IMPDH) b0835 b0835 53335 S-adenosyl-L-methionine-dependent methyltransferases b0836 b0836 54495 UBC-like b0837 b0837 50952 Soluble quinoprotein glucose dehydrogenase b0839 b0839 56601 beta-lactamase/transpeptidase-like b0839 b0839 69189 Penicillin-binding protein 5, C-terminal domain b0840 b0840 46785 Winged helix DNA-binding domain b0840 b0840 52512 Phosphosugar isomerase b0841 b0841 48317 Acid phosphatase/Vanadium-dependent haloperoxidase b0846 b0846 46689 Homeodomain-like b0847 b0847 51735 NAD(P)-binding Rossmann-fold domains b0849 b0849 52833 Thioredoxin-like b0851 b0851 55469 NADH oxidase/flavin reductase b0852 b0852 56059 Glutathione synthetase ATP-binding domain-like b0854 b0854 53850 Periplasmic binding protein-like II b0859 b0859 53335 S-adenosyl-L-methionine-dependent methyltransferases b0860 b0860 53850 Periplasmic binding protein-like II b0863 b0863 53850 Periplasmic binding protein-like II b0864 b0864 53795 PEP carboxykinase-like b0867 b0867 50998 Quinoprotein alcohol dehydrogenase-like b0867 b0867 55846 N-acetylmuramoyl-L-alanine amidase-like b0868 b0868 51735 NAD(P)-binding Rossmann-fold domains b0870 b0870 53383 PLP-dependent transferases b0871 b0871 52467 DHS-like NAD/FAD-binding domain b0871 b0871 52518 Thiamin diphosphate-binding fold (THDP-binding) b0872 b0872 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain b0872 b0872 54292 2Fe-2S ferredoxin-like b0872 b0872 63380 Riboflavin synthase domain-like b0875 b0875 81338 Aquaporin-like b0876 b0876 52540 P-loop containing nucleoside triphosphate hydrolases b0879 b0879_1 53795 PEP carboxykinase-like b0880 b0880 50249 Nucleic acid-binding proteins b0881 b0881 54736 ClpS-like b0882 b0882 52540 P-loop containing nucleoside triphosphate hydrolases b0882 b0882 81923 Double Clp-N motif b0884 b0884 50249 Nucleic acid-binding proteins b0885 b0885 49503 Cupredoxins b0886 b0886_2 53795 PEP carboxykinase-like b0887 b0887_2 53795 PEP carboxykinase-like b0888 b0888 51905 FAD/NAD(P)-binding domain b0889 b0889 46785 Winged helix DNA-binding domain b0889 b0889 54909 Dimeric alpha+beta barrel b0890 b0890 52540 P-loop containing nucleoside triphosphate hydrolases b0892 b0892 52540 P-loop containing nucleoside triphosphate hydrolases b0893 b0893 46589 tRNA-binding arm b0893 b0893 55681 Class II aaRS and biotin synthetases b0895 b0895 54862 4Fe-4S ferredoxins b0897 b0897 52499 Cysteine hydrolase b0900 b0900 46785 Winged helix DNA-binding domain b0900 b0900 53850 Periplasmic binding protein-like II b0901 b0901 52218 Flavoproteins b0902 b0902 53613 Ribokinase-like b0903 b0903 51998 PFL-like glycyl radical enzymes b0906 b0906 63393 RBP12 subunit of RNA polymerase II b0907 b0907 53383 PLP-dependent transferases b0908 b0908 55205 EPT/RTPC-like b0910 b0910 52540 P-loop containing nucleoside triphosphate hydrolases b0911 b0911 50249 Nucleic acid-binding proteins b0912 b0912 47729 IHF-like DNA-binding proteins b0914 b0914_2 52540 P-loop containing nucleoside triphosphate hydrolases b0915 b0915 53756 UDP-Glycosyltransferase/glycogen phosphorylase b0918 b0918 53448 Nucleotide-diphospho-sugar transferases b0919 b0919 56112 Protein kinase-like (PK-like) b0921 b0921 53335 S-adenosyl-L-methionine-dependent methyltransferases b0924 b0924_1 52540 P-loop containing nucleoside triphosphate hydrolases b0924 b0924_3 52540 P-loop containing nucleoside triphosphate hydrolases b0925 b0925 47090 PGBD-like b0926 b0926 55166 Hedgehog/DD-pepidase b0927 b0927 56281 Metallo-hydrolase/oxidoreductase b0928 b0928 53383 PLP-dependent transferases b0929 b0929 56935 Porins b0930 b0930 50249 Nucleic acid-binding proteins b0930 b0930 55681 Class II aaRS and biotin synthetases b0931 b0931 49417 p53-like transcription factors b0932 b0932 55486 Metalloproteases (zincins), catalytic doma b0932 b0932 63737 Leukotriene A4 hydrolase N-terminal domain b0933 b0933 53795 PEP carboxykinase-like b0935 b0935 51679 Bacterial luciferase-like b0937 b0937 52218 Flavoproteins b0938 b0938 49401 Bacterial adhesins b0939 b0939 49354 PapD-like b0939 b0939 49584 Periplasmic chaperone C-domain b0941 b0941 49401 Bacterial adhesins b0942 b0942 49401 Bacterial adhesins b0943 b0943 49401 Bacterial adhesins b0945 b0945 51395 FMN-linked oxidoreductases b0947 b0947 54292 2Fe-2S ferredoxin-like b0948 b0948 53335 S-adenosyl-L-methionine-dependent methyltransferases b0949 b0949_1 52540 P-loop containing nucleoside triphosphate hydrolases b0949 b0949_2 52540 P-loop containing nucleoside triphosphate hydrolases b0954 b0954 54637 Thioesterase/thiol ester dehydrase-isomerase b0957 b0957 56925 OMPA-like b0962 b0962 52540 P-loop containing nucleoside triphosphate hydrolases b0963 b0963 52335 Methylglyoxal synthase-like b0968 b0968 54975 Acylphosphatase-like b0972 b0972 56770 Nickel-iron hydrogenase, small subunit b0973 b0973 56762 Nickel-iron hydrogenase, large subunit b0974 b0974 81342 Transmembrane di-heme cytochromes b0975 b0975 53163 HybD-like b0976 b0976 52833 Thioredoxin-like b0980 b0980 53254 Phosphoglycerate mutase-like b0981 b0981 52540 P-loop containing nucleoside triphosphate hydrolases b0989 b0989 50249 Nucleic acid-binding proteins b0990 b0990 50249 Nucleic acid-binding proteins b0992 b0992 54862 4Fe-4S ferredoxins b0993 b0993_1 47384 Homodimeric domain of signal transducing histidine kinase b0993 b0993_1 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b0993 b0993_2 47226 Histidine-containing phosphotransfer domain, HPT domain b0993 b0993_2 52172 CheY-like b0994 b0994 53822 Periplasmic binding protein-like I b0995 b0995 52172 CheY-like b0996 b0996 46626 Cytochrome c b0996 b0996 48695 Multiheme cytochromes b0997 b0997 50692 ADC-like b0997 b0997 53706 Formate dehydrogenase/DMSO reductase, domains 1-3 b1000 b1000 46565 Chaperone J-domain b1000 b1000 49493 HSP40/DnaJ peptide-binding domain b1002 b1002 53254 Phosphoglycerate mutase-like b1004 b1004 52218 Flavoproteins b1008 b1008 55469 NADH oxidase/flavin reductase b1009 b1009 53474 alpha/beta-Hydrolases b1010 b1010 55298 YjgF-like b1011 b1011 52499 Cysteine hydrolase b1013 b1013 46689 Homeodomain-like b1014 b1014_1 51730 FAD-linked oxidoreductase b1014 b1014_1 81935 N-terminal domain of bifunctional PutA protein b1014 b1014_2 53720 ALDH-like b1018 b1018 49503 Cupredoxins b1020 b1020 52540 P-loop containing nucleoside triphosphate hydrolases b1022 b1022 53448 Nucleotide-diphospho-sugar transferases b1024 b1024 48452 TPR-like b1026 b1026 53098 Ribonuclease H-like b1028 b1028 52151 FabD/lysophospholipase-like b1033 b1033 51735 NAD(P)-binding Rossmann-fold domains b1034 b1034 51556 Metallo-dependent hydrolases b1040 b1040 46894 C-terminal effector domain of the bipartite response regulators b1046 b1046 56024 Phospholipase D/nuclease b1049 b1049 53448 Nucleotide-diphospho-sugar transferases b1055 b1055 52821 Rhodanese/Cell cycle control phosphatase b1055 b1055 54975 Acylphosphatase-like b1057 b1057 81342 Transmembrane di-heme cytochromes b1059 b1059 51905 FAD/NAD(P)-binding domain b1059 b1059 54373 FAD-linked reductases, C-terminal domain b1061 b1061 54857 DNA damage-inducible protein DinI b1062 b1062 51556 Metallo-dependent hydrolases b1064 b1064 47616 Glutathione S-transferase (GST), C-terminal domain b1064 b1064 52833 Thioredoxin-like b1066 b1066 55729 Acyl-CoA N-acyltransferases (Nat) b1068 b1068 51735 NAD(P)-binding Rossmann-fold domains b1081 b1081 53955 Lysozyme-like b1083 b1083 64518 F41 fragment of flagellin b1084 b1084_1 50249 Nucleic acid-binding proteins b1086 b1086 55120 Pseudouridine synthase b1086 b1086 55174 Alpha-L RNA-binding motif b1087 b1087 52972 Maf/Ham1 b1091 b1091 53901 Thiolase-like b1092 b1092 52151 FabD/lysophospholipase-like b1092 b1092 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase b1093 b1093 51735 NAD(P)-binding Rossmann-fold domains b1094 b1094 47336 ACP-like b1095 b1095 53901 Thiolase-like b1096 b1096 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes b1097 b1097 46626 Cytochrome c b1098 b1098 52540 P-loop containing nucleoside triphosphate hydrolases b1099 b1099 48019 DNA polymerase III clamp loader subunits, C-terminal domain b1099 b1099 52540 P-loop containing nucleoside triphosphate hydrolases b1100 b1100 51556 Metallo-dependent hydrolases b1101 b1101_2 55604 Glucose permease domain IIB b1102 b1102 56935 Porins b1106 b1106 56112 Protein kinase-like (PK-like) b1107 b1107 51445 (Trans)glycosidases b1109 b1109 51905 FAD/NAD(P)-binding domain b1113 b1113 54106 LysM domain b1114 b1114 52540 P-loop containing nucleoside triphosphate hydrolases b1118 b1118 50692 ADC-like b1119 b1119 53067 Actin-like ATPase domain b1120 b1120 52467 DHS-like NAD/FAD-binding domain b1123 b1123 53850 Periplasmic binding protein-like II b1126 b1126 53795 PEP carboxykinase-like b1127 b1127 53187 Zn-dependent exopeptidases b1127 b1127 55031 Bacterial exopeptidase dimerisation domain b1129 b1129 47384 Homodimeric domain of signal transducing histidine kinase b1129 b1129 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b1130 b1130 52172 CheY-like b1131 b1131 48557 L-aspartase-like b1134 b1134 55811 Nudix b1135 b1135 55120 Pseudouridine synthase b1136 b1136 53659 Isocitrate/Isopropylmalate dehydrogenases b1137 b1137 53335 S-adenosyl-L-methionine-dependent methyltransferases b1140 b1140 54171 DNA-binding domain b1140 b1140 56349 DNA breaking-rejoining enzymes b1145 b1145 51306 LexA/Signal peptidase b1146 b1146 47413 lambda repressor-like DNA-binding domains b1149 b1149 46785 Winged helix DNA-binding domain b1153 b1153 50998 Quinoprotein alcohol dehydrogenase-like b1157 b1157 69349 Phage fibre proteins b1158 b1158 46689 Homeodomain-like b1158 b1158 53041 Resolvase-like b1159 b1159 54060 His-Me finger endonucleases b1162 b1162 46955 Putative DNA-binding domain b1169 b1169 51126 Pectin lyase-like b1174 b1174 55229 Cell division protein MinE topological specificity domain b1175 b1175 52540 P-loop containing nucleoside triphosphate hydrolases b1176 b1176 63848 Cell-division inhibitor MinC, C-terminal domain b1180 b1180 56529 FAH b1183 b1183 51306 LexA/Signal peptidase b1184 b1184 56672 DNA/RNA polymerases b1187 b1187 46785 Winged helix DNA-binding domain b1187 b1187 48008 Fatty acid responsive transcription factor FadR, C-terminal domain b1188 b1188 55486 Metalloproteases (zincins), catalytic doma b1189 b1189 51971 Nucleotide-binding domain b1189 b1189 54373 FAD-linked reductases, C-terminal domain b1190 b1190 50621 Alanine racemase C-terminal domain-like b1190 b1190 51419 PLP-binding barrel b1191 b1191 51735 NAD(P)-binding Rossmann-fold domains b1193 b1193 53955 Lysozyme-like b1198 b1198_1 53062 IIA domain of mannose transporter, IIA-Man b1198 b1198_1 55594 HPr-like b1198 b1198_2 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain b1198 b1198_2 52009 Phosphohistidine domain b1201 b1201 46689 Homeodomain-like b1201 b1201 52540 P-loop containing nucleoside triphosphate hydrolases b1201 b1201 55785 PYP-like sensor domain (PAS domain) b1202 b1202 51126 Pectin lyase-like b1202 b1202 56925 OMPA-like b1203 b1203 52540 P-loop containing nucleoside triphosphate hydrolases b1203 b1203 81271 TGS-like b1204 b1204 53178 Peptidyl-tRNA hydrolase b1206 b1206 52091 Anti-sigma factor antagonist SpoIIaa b1207 b1207 53271 PRTase-like b1208 b1208 54211 Ribosomal protein S5 domain 2-like b1208 b1208 55060 GHMP Kinase, C-terminal domain b1210 b1210 51735 NAD(P)-binding Rossmann-fold domains b1210 b1210 69075 Glutamyl tRNA-reductase dimerization domain b1210 b1210 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain b1211 b1211 75620 Polypeptide chain release factor 2 (RF2) b1212 b1212 53335 S-adenosyl-L-methionine-dependent methyltransferases b1214 b1214 48452 TPR-like b1215 b1215 51569 Aldolase b1219 b1219 75169 YchN-like b1221 b1221 52172 CheY-like b1222 b1222 55781 GAF domain-like b1222 b1222 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b1224 b1224 50692 ADC-like b1224 b1224 53706 Formate dehydrogenase/DMSO reductase, domains 1-3 b1225 b1225 54862 4Fe-4S ferredoxins b1232 b1232 53328 Formyltransferase b1232 b1232 55021 Regulatory domain in the aminoacid metabolism b1233 b1233 54427 NTF2-like b1235 b1235 52172 CheY-like b1236 b1236 53448 Nucleotide-diphospho-sugar transferases b1237 b1237 81273 H-NS histone-like proteins b1241 b1241_1 53720 ALDH-like b1241 b1241_2 56796 Dehydroquinate synthase-like b1243 b1243 53850 Periplasmic binding protein-like II b1246 b1246 52540 P-loop containing nucleoside triphosphate hydrolases b1247 b1247 53795 PEP carboxykinase-like b1249 b1249 56024 Phospholipase D/nuclease b1250 b1250 51735 NAD(P)-binding Rossmann-fold domains b1250 b1250 81324 Voltage-gated potassium channels b1252 b1252 74653 TolA/TonB C-terminal domain b1253 b1253 54637 Thioesterase/thiol ester dehydrase-isomerase b1256 b1256 56925 OMPA-like b1257 b1257 47240 Ferritin-like b1258 b1258 47240 Ferritin-like b1260 b1260 51366 Ribulose-phoshate binding barrel b1261 b1261 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes b1262 b1262_1 51366 Ribulose-phoshate binding barrel b1262 b1262_2 51366 Ribulose-phoshate binding barrel b1263 b1263_1 52317 Class I glutamine amidotransferase-like b1263 b1263_2 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain b1263 b1263_2 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain b1264 b1264 56322 ADC synthase b1269 b1269 55120 Pseudouridine synthase b1269 b1269 55174 Alpha-L RNA-binding motif b1270 b1270 52540 P-loop containing nucleoside triphosphate hydrolases b1271 b1271 51735 NAD(P)-binding Rossmann-fold domains b1272 b1272 52096 ClpP/crotonase b1274 b1274 56712 Prokaryotic type I DNA topoisomerase b1274 b1274 57783 Zinc beta-ribbon b1275 b1275 46785 Winged helix DNA-binding domain b1275 b1275 53850 Periplasmic binding protein-like II b1276 b1276 52016 Aconitase b1276 b1276 53732 Aconitase iron-sulfur domain b1278 b1278 48317 Acid phosphatase/Vanadium-dependent haloperoxidase b1280 b1280 48452 TPR-like b1281 b1281 51366 Ribulose-phoshate binding barrel b1282 b1282 55159 eIF1-like b1284 b1284 46785 Winged helix DNA-binding domain b1284 b1284 52512 Phosphosugar isomerase b1285 b1285 55785 PYP-like sensor domain (PAS domain) b1286 b1286 50249 Nucleic acid-binding proteins b1288 b1288 51735 NAD(P)-binding Rossmann-fold domains b1289 b1289 52980 Restriction endonuclease-like b1290 b1290 53795 PEP carboxykinase-like b1291 b1291 52540 P-loop containing nucleoside triphosphate hydrolases b1294 b1294 53850 Periplasmic binding protein-like II b1299 b1299 51182 RmlC-like cupins b1300 b1300 53720 ALDH-like b1301 b1301 51905 FAD/NAD(P)-binding domain b1302 b1302 53383 PLP-dependent transferases b1308 b1308 52821 Rhodanese/Cell cycle control phosphatase b1310 b1310 53850 Periplasmic binding protein-like II b1313 b1313 50129 GroES-like b1313 b1313 51735 NAD(P)-binding Rossmann-fold domains b1314 b1314 51658 Xylose isomerase-like b1315 b1315 51735 NAD(P)-binding Rossmann-fold domains b1316 b1316 48208 Six-hairpin glycosyltransferases b1316 b1316 74650 Galactose mutarotase-like b1317 b1317 56784 HAD-like b1318 b1318 50331 MOP-like b1318 b1318 53795 PEP carboxykinase-like b1319 b1319 56935 Porins b1320 b1320 47413 lambda repressor-like DNA-binding domains b1320 b1320 53822 Periplasmic binding protein-like I b1321 b1321 52540 P-loop containing nucleoside triphosphate hydrolases b1323 b1323 46689 Homeodomain-like b1323 b1323 52540 P-loop containing nucleoside triphosphate hydrolases b1323 b1323 55021 Regulatory domain in the aminoacid metabolism b1323 b1323 55785 PYP-like sensor domain (PAS domain) b1324 b1324 52833 Thioredoxin-like b1326 b1326 53187 Zn-dependent exopeptidases b1327 b1327 53474 alpha/beta-Hydrolases b1328 b1328 46785 Winged helix DNA-binding domain b1328 b1328 53850 Periplasmic binding protein-like II b1329 b1329 53850 Periplasmic binding protein-like II b1330 b1330 50182 Sm-like ribonucleoproteins b1330 b1330 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain b1330 b1330 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region b1333 b1333 52402 Adenine nucleotide alpha hydrolases-like b1334 b1334 46785 Winged helix DNA-binding domain b1334 b1334 51206 cAMP-binding domain-like b1335 b1335 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain b1337 b1337 53187 Zn-dependent exopeptidases b1337 b1337 55031 Bacterial exopeptidase dimerisation domain b1339 b1339 46785 Winged helix DNA-binding domain b1339 b1339 53850 Periplasmic binding protein-like II b1341 b1341 55073 Adenylyl and guanylyl cyclase catalytic domain b1341 b1341 55785 PYP-like sensor domain (PAS domain) b1343 b1343 52540 P-loop containing nucleoside triphosphate hydrolases b1344 b1344 52402 Adenine nucleotide alpha hydrolases-like b1345 b1345 47823 lambda integrase-like, N-terminal domain b1345 b1345 56349 DNA breaking-rejoining enzymes b1355 b1355 46934 UBA-like b1356 b1356 46689 Homeodomain-like b1360 b1360 52540 P-loop containing nucleoside triphosphate hydrolases b1361 b1361 46785 Winged helix DNA-binding domain b1371 b1371 56925 OMPA-like b1372 b1372 49464 Carboxypeptidase D, a regulatory domain b1372 b1372 69349 Phage fibre proteins b1374 b1374 46689 Homeodomain-like b1374 b1374 53041 Resolvase-like b1377 b1377 56935 Porins b1378 b1378_1 52518 Thiamin diphosphate-binding fold (THDP-binding) b1378 b1378_1 52922 TK C-terminal domain-like b1378 b1378_2 46548 alpha-helical ferredoxin b1378 b1378_2 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III b1378 b1378_3 52518 Thiamin diphosphate-binding fold (THDP-binding) b1380 b1380 51735 NAD(P)-binding Rossmann-fold domains b1380 b1380 52283 Formate/glycerate dehydrogenase catalytic domain-like b1384 b1384 46689 Homeodomain-like b1384 b1384 51215 Regulatory protein AraC b1386 b1386 49998 Copper amine oxidase, domain 3 (catalytic) b1386 b1386 54416 Copper amine oxidase, domains 1 and 2 b1386 b1386 55383 Copper amine oxidase, domain N b1387 b1387_1 53720 ALDH-like b1387 b1387_2 54637 Thioesterase/thiol ester dehydrase-isomerase b1388 b1388 47240 Ferritin-like b1390 b1390 47240 Ferritin-like b1392 b1392 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain b1392 b1392 54292 2Fe-2S ferredoxin-like b1392 b1392 63380 Riboflavin synthase domain-like b1393 b1393 52096 ClpP/crotonase b1394 b1394 52096 ClpP/crotonase b1395 b1395 48179 6-phosphogluconate dehydrogenase C-terminal domain-like b1395 b1395 51735 NAD(P)-binding Rossmann-fold domains b1396 b1396 54637 Thioesterase/thiol ester dehydrase-isomerase b1397 b1397 53901 Thiolase-like b1398 b1398 56801 Acetyl-CoA synthetase-like b1399 b1399 46785 Winged helix DNA-binding domain b1400 b1400 51161 Trimeric LpxA-like enzymes b1402 b1402 53098 Ribonuclease H-like b1403 b1403 46689 Homeodomain-like b1404 b1404 46689 Homeodomain-like b1404 b1404 53098 Ribonuclease H-like b1406 b1406 51430 NAD(P)-linked oxidoreductase b1410 b1410 53335 S-adenosyl-L-methionine-dependent methyltransferases b1410 b1410 53474 alpha/beta-Hydrolases b1411 b1411 52799 (Phosphotyrosine protein) phosphatases II b1412 b1412 52218 Flavoproteins b1415 b1415 53720 ALDH-like b1418 b1418 81342 Transmembrane di-heme cytochromes b1421 b1421 47170 Aspartate receptor, ligand-binding domain b1422 b1422 46785 Winged helix DNA-binding domain b1422 b1422 53850 Periplasmic binding protein-like II b1427 b1427 55729 Acyl-CoA N-acyltransferases (Nat) b1428 b1428 51161 Trimeric LpxA-like enzymes b1430 b1430 53335 S-adenosyl-L-methionine-dependent methyltransferases b1434 b1434 47413 lambda repressor-like DNA-binding domains b1434 b1434 51182 RmlC-like cupins b1435 b1435 51366 Ribulose-phoshate binding barrel b1438 b1438 47413 lambda repressor-like DNA-binding domains b1439 b1439_1 46785 Winged helix DNA-binding domain b1439 b1439_2 53383 PLP-dependent transferases b1440 b1440 53850 Periplasmic binding protein-like II b1441 b1441 50331 MOP-like b1441 b1441 53795 PEP carboxykinase-like b1444 b1444 53720 ALDH-like b1448 b1448 55729 Acyl-CoA N-acyltransferases (Nat) b1450 b1450 46785 Winged helix DNA-binding domain b1451 b1451 56935 Porins b1452 b1452 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase b1454 b1454 47616 Glutathione S-transferase (GST), C-terminal domain b1454 b1454 52833 Thioredoxin-like b1461 b1461 55331 Tautomerase/MIF b1462 b1462 50475 FMN-binding split barrel b1463 b1463 54001 Cysteine proteinases b1467 b1467 54862 4Fe-4S ferredoxins b1468 b1468 50692 ADC-like b1468 b1468 53706 Formate dehydrogenase/DMSO reductase, domains 1-3 b1471 b1471 52058 L domain-like b1472 b1472 56935 Porins b1474 b1474 50692 ADC-like b1474 b1474 53706 Formate dehydrogenase/DMSO reductase, domains 1-3 b1475 b1475 54862 4Fe-4S ferredoxins b1475 b1475 81597 Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor b1476 b1476 81342 Transmembrane di-heme cytochromes b1479 b1479 51735 NAD(P)-binding Rossmann-fold domains b1479 b1479 53223 Aminoacid dehydrogenase-like, N-terminal domain b1482 b1482 82784 OsmC-like b1483 b1483 53795 PEP carboxykinase-like b1484 b1484 52540 P-loop containing nucleoside triphosphate hydrolases b1487 b1487 53850 Periplasmic binding protein-like II b1489 b1489 55785 PYP-like sensor domain (PAS domain) b1490 b1490 55073 Adenylyl and guanylyl cyclase catalytic domain b1491 b1491 51445 (Trans)glycosidases b1493 b1493 53383 PLP-dependent transferases b1494 b1494 63411 LuxS/MPP-like metallohydrolase b1495 b1495 56935 Porins b1496 b1496_2 52540 P-loop containing nucleoside triphosphate hydrolases b1498 b1498 53649 Alkaline phosphatase-like b1499 b1499 46689 Homeodomain-like b1501 b1501 50692 ADC-like b1501 b1501 53706 Formate dehydrogenase/DMSO reductase, domains 1-3 b1502 b1502 49401 Bacterial adhesins b1503 b1503 49401 Bacterial adhesins b1504 b1504 49401 Bacterial adhesins b1506 b1506 46689 Homeodomain-like b1508 b1508 47413 lambda repressor-like DNA-binding domains b1509 b1509 51126 Pectin lyase-like b1512 b1512 46689 Homeodomain-like b1513 b1513_1 52540 P-loop containing nucleoside triphosphate hydrolases b1513 b1513_2 52540 P-loop containing nucleoside triphosphate hydrolases b1516 b1516 53822 Periplasmic binding protein-like I b1517 b1517 51366 Ribulose-phoshate binding barrel b1518 b1518 54909 Dimeric alpha+beta barrel b1519 b1519 53335 S-adenosyl-L-methionine-dependent methyltransferases b1521 b1521 48179 6-phosphogluconate dehydrogenase C-terminal domain-like b1521 b1521 51735 NAD(P)-binding Rossmann-fold domains b1522 b1522 55073 Adenylyl and guanylyl cyclase catalytic domain b1524 b1524 56601 beta-lactamase/transpeptidase-like b1525 b1525 53720 ALDH-like b1526 b1526 46785 Winged helix DNA-binding domain b1526 b1526 53850 Periplasmic binding protein-like II b1531 b1531 46689 Homeodomain-like b1535 b1535 55073 Adenylyl and guanylyl cyclase catalytic domain b1538 b1538 55486 Metalloproteases (zincins), catalytic doma b1539 b1539 51735 NAD(P)-binding Rossmann-fold domains b1540 b1540 46785 Winged helix DNA-binding domain b1542 b1542 48179 6-phosphogluconate dehydrogenase C-terminal domain-like b1542 b1542 51735 NAD(P)-binding Rossmann-fold domains b1545 b1545 46689 Homeodomain-like b1545 b1545 53041 Resolvase-like b1547 b1547 69349 Phage fibre proteins b1548 b1548 46955 Putative DNA-binding domain b1551 b1551 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain b1552 b1552 50249 Nucleic acid-binding proteins b1554 b1554 53955 Lysozyme-like b1557 b1557 50249 Nucleic acid-binding proteins b1558 b1558 50249 Nucleic acid-binding proteins b1570 b1570 47413 lambda repressor-like DNA-binding domains b1578 b1578 53098 Ribonuclease H-like b1579 b1579 47823 lambda integrase-like, N-terminal domain b1579 b1579 56349 DNA breaking-rejoining enzymes b1580 b1580 50129 GroES-like b1580 b1580 51735 NAD(P)-binding Rossmann-fold domains b1581 b1581 51604 Enolase C-terminal domain-like b1581 b1581 54826 Enolase N-terminal domain-like b1584 b1584 55729 Acyl-CoA N-acyltransferases (Nat) b1587 b1587 50692 ADC-like b1587 b1587 53706 Formate dehydrogenase/DMSO reductase, domains 1-3 b1588 b1588 50692 ADC-like b1588 b1588 53706 Formate dehydrogenase/DMSO reductase, domains 1-3 b1589 b1589 54862 4Fe-4S ferredoxins b1592 b1592 81340 Clc chloride channel b1594 b1594 46785 Winged helix DNA-binding domain b1594 b1594 53067 Actin-like ATPase domain b1595 b1595 46785 Winged helix DNA-binding domain b1595 b1595 53850 Periplasmic binding protein-like II b1598 b1598 50494 Trypsin-like serine proteases b1602 b1602 52467 DHS-like NAD/FAD-binding domain b1603 b1603 51735 NAD(P)-binding Rossmann-fold domains b1603 b1603 52283 Formate/glycerate dehydrogenase catalytic domain-like b1606 b1606 51735 NAD(P)-binding Rossmann-fold domains b1608 b1608 52172 CheY-like b1609 b1609 47384 Homodimeric domain of signal transducing histidine kinase b1609 b1609 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b1610 b1610 56596 Replication terminator protein (Tus) b1611 b1611 48557 L-aspartase-like b1615 b1615 56935 Porins b1617 b1617 49303 beta-Galactosidase/glucuronidase domain b1617 b1617 49785 Galactose-binding domain-like b1617 b1617 51445 (Trans)glycosidases b1618 b1618 46689 Homeodomain-like b1619 b1619 51735 NAD(P)-binding Rossmann-fold domains b1620 b1620 47413 lambda repressor-like DNA-binding domains b1620 b1620 53822 Periplasmic binding protein-like I b1621 b1621_2 55604 Glucose permease domain IIB b1622 b1622 53383 PLP-dependent transferases b1623 b1623 51556 Metallo-dependent hydrolases b1625 b1625 68989 Hemolysin expression modulating protein HHA b1628 b1628 54862 4Fe-4S ferredoxins b1629 b1629_1 46548 alpha-helical ferredoxin b1629 b1629_1 51230 Single hybrid motif b1631 b1631 50156 PDZ domain-like b1632 b1632 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 b1633 b1633 48150 DNA-glycosylase b1635 b1635 47616 Glutathione S-transferase (GST), C-terminal domain b1635 b1635 52833 Thioredoxin-like b1636 b1636 53613 Ribokinase-like b1637 b1637 52374 Nucleotidylyl transferase b1637 b1637 55174 Alpha-L RNA-binding motif b1638 b1638 50475 FMN-binding split barrel b1640 b1640 53067 Actin-like ATPase domain b1642 b1642 46785 Winged helix DNA-binding domain b1645 b1645 53383 PLP-dependent transferases b1646 b1646 49329 Cu,Zn superoxide dismutase-like b1647 b1647 51430 NAD(P)-linked oxidoreductase b1649 b1649 46689 Homeodomain-like b1650 b1650 51395 FMN-linked oxidoreductases b1651 b1651 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase b1652 b1652 53098 Ribonuclease H-like b1653 b1653 52540 P-loop containing nucleoside triphosphate hydrolases b1654 b1654 52833 Thioredoxin-like b1656 b1656 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain b1656 b1656 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain b1658 b1658 47413 lambda repressor-like DNA-binding domains b1658 b1658 53822 Periplasmic binding protein-like I b1659 b1659 46785 Winged helix DNA-binding domain b1659 b1659 53850 Periplasmic binding protein-like II b1661 b1661 53335 S-adenosyl-L-methionine-dependent methyltransferases b1662 b1662 63380 Riboflavin synthase domain-like b1664 b1664 51126 Pectin lyase-like b1668 b1668 51735 NAD(P)-binding Rossmann-fold domains b1668 b1668 51905 FAD/NAD(P)-binding domain b1669 b1669 47986 DEATH domain b1670 b1670 81342 Transmembrane di-heme cytochromes b1671 b1671 54862 4Fe-4S ferredoxins b1673 b1673 48310 Aldehyde ferredoxin oxidoreductase, C-terminal domains b1673 b1673 56228 Aldehyde ferredoxin oxidoreductase, N-terminal domain b1674 b1674 54862 4Fe-4S ferredoxins b1676 b1676 50800 PK beta-barrel domain-like b1676 b1676 51621 Phosphoenolpyruvate/pyruvate domain b1676 b1676 52935 Pyruvate kinase, C-terminal domain b1678 b1678 54106 LysM domain b1679 b1679 82649 SufE-like b1680 b1680 53383 PLP-dependent transferases b1682 b1682 53795 PEP carboxykinase-like b1686 b1686 54637 Thioesterase/thiol ester dehydrase-isomerase b1687 b1687 46548 alpha-helical ferredoxin b1687 b1687 55103 FAD-linked oxidases, C-terminal domain b1687 b1687 56176 FAD-binding domain b1688 b1688 52440 PreATP-grasp domain b1690 b1690 53167 Purine and uridine phosphorylases b1692 b1692 51735 NAD(P)-binding Rossmann-fold domains b1692 b1692 53223 Aminoacid dehydrogenase-like, N-terminal domain b1693 b1693 51569 Aldolase b1694 b1694_1 53316 CoA transferase b1694 b1694_2 53316 CoA transferase b1696 b1696 46689 Homeodomain-like b1696 b1696 51215 Regulatory protein AraC b1697 b1697 52402 Adenine nucleotide alpha hydrolases-like b1698 b1698 52402 Adenine nucleotide alpha hydrolases-like b1698 b1698 52467 DHS-like NAD/FAD-binding domain b1699 b1699 51905 FAD/NAD(P)-binding domain b1700 b1700 54862 4Fe-4S ferredoxins b1702 b1702 51621 Phosphoenolpyruvate/pyruvate domain b1702 b1702 52009 Phosphohistidine domain b1702 b1702 56059 Glutathione synthetase ATP-binding domain-like b1703 b1703 52540 P-loop containing nucleoside triphosphate hydrolases b1704 b1704 51569 Aldolase b1709 b1709 52540 P-loop containing nucleoside triphosphate hydrolases b1710 b1710 52833 Thioredoxin-like b1711 b1711 81345 ABC transporter involved in vitamin B12 uptake, BtuC b1712 b1712 47729 IHF-like DNA-binding proteins b1713 b1713 46955 Putative DNA-binding domain b1713 b1713 50249 Nucleic acid-binding proteins b1713 b1713 54991 Anticodon-binding domain of PheRS b1713 b1713 55681 Class II aaRS and biotin synthetases b1713 b1713 56037 B3/B4 domain of PheRS, PheT b1714 b1714 46589 tRNA-binding arm b1714 b1714 55681 Class II aaRS and biotin synthetases b1716 b1716 74731 Ribosomal protein L20 b1718 b1718 54364 Translation initiation factor IF3, N-terminal domain b1718 b1718 55200 Translation initiation factor IF3, C-terminal domain b1719 b1719 52954 Anticodon-binding domain of Class II aaRS b1719 b1719 55186 Threonyl-tRNA synthetase (ThrRS), second 'additional' domain b1719 b1719 55681 Class II aaRS and biotin synthetases b1719 b1719 81271 TGS-like b1721 b1721 48403 Ankyrin repeat b1725 b1725 56112 Protein kinase-like (PK-like) b1727 b1727 56784 HAD-like b1732 b1732 52317 Class I glutamine amidotransferase-like b1732 b1732 56634 Heme-linked catalases b1734 b1734 51735 NAD(P)-binding Rossmann-fold domains b1734 b1734 56327 LDH C-terminal domain-like b1735 b1735 46689 Homeodomain-like b1735 b1735 51182 RmlC-like cupins b1736 b1736 46973 Enzyme IIa from lactose specific PTS, IIa-lac b1738 b1738 52794 Enzyme IIB-cellobiose b1740 b1740 52402 Adenine nucleotide alpha hydrolases-like b1741 b1741 82771 GIY-YIG endonuclease b1744 b1744 53187 Zn-dependent exopeptidases b1746 b1746 53720 ALDH-like b1747 b1747 55729 Acyl-CoA N-acyltransferases (Nat) b1748 b1748 53383 PLP-dependent transferases b1749 b1749 56219 DNase I-like b1753 b1753 69118 Antioxidant defence protein AhpD b1754 b1754 53850 Periplasmic binding protein-like II b1756 b1756 53795 PEP carboxykinase-like b1759 b1759 55811 Nudix b1761 b1761 51735 NAD(P)-binding Rossmann-fold domains b1761 b1761 53223 Aminoacid dehydrogenase-like, N-terminal domain b1763 b1763 56712 Prokaryotic type I DNA topoisomerase b1764 b1764 55326 Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain b1764 b1764 56042 Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain b1765 b1765 55469 NADH oxidase/flavin reductase b1766 b1766 52096 ClpP/crotonase b1767 b1767 53774 Glutaminase/Asparaginase b1770 b1770 46785 Winged helix DNA-binding domain b1770 b1770 52512 Phosphosugar isomerase b1771 b1771 51430 NAD(P)-linked oxidoreductase b1773 b1773 51569 Aldolase b1774 b1774 50129 GroES-like b1774 b1774 51735 NAD(P)-binding Rossmann-fold domains b1776 b1776 50129 GroES-like b1776 b1776 51735 NAD(P)-binding Rossmann-fold domains b1778 b1778 51316 Mss4-like b1779 b1779 51735 NAD(P)-binding Rossmann-fold domains b1779 b1779 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain b1781 b1781 51430 NAD(P)-linked oxidoreductase b1782 b1782 56935 Porins b1783 b1783 52540 P-loop containing nucleoside triphosphate hydrolases b1787 b1787 55826 Hypothetical protein HI1434 (YbaK homologue) b1790 b1790 51182 RmlC-like cupins b1797 b1797 51182 RmlC-like cupins b1800 b1800 53659 Isocitrate/Isopropylmalate dehydrogenases b1802 b1802 50022 ISP domain b1802 b1802 55961 Bet v1-like b1803 b1803 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain b1803 b1803 54292 2Fe-2S ferredoxin-like b1803 b1803 63380 Riboflavin synthase domain-like b1804 b1804 53098 Ribonuclease H-like b1805 b1805 56801 Acetyl-CoA synthetase-like b1807 b1807 53098 Ribonuclease H-like b1808 b1808 52540 P-loop containing nucleoside triphosphate hydrolases b1812 b1812 56322 ADC synthase b1813 b1813 55811 Nudix b1816 b1816_2 54631 CBS-domain b1817 b1817_1 53062 IIA domain of mannose transporter, IIA-Man b1817 b1817_2 52728 PTS IIb component b1822 b1822 53335 S-adenosyl-L-methionine-dependent methyltransferases b1823 b1823 50249 Nucleic acid-binding proteins b1827 b1827 46785 Winged helix DNA-binding domain b1827 b1827 55781 GAF domain-like b1830 b1830 50156 PDZ domain-like b1830 b1830 52096 ClpP/crotonase b1835 b1835 53335 S-adenosyl-L-methionine-dependent methyltransferases b1839 b1839 51445 (Trans)glycosidases b1841 b1841 81296 E set domains b1842 b1842 46575 Theta subunit of DNA polymerase III b1843 b1843 56317 Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase b1844 b1844 53098 Ribonuclease H-like b1845 b1845 50993 Prolyl oligopeptidase, N-terminal domain b1845 b1845 53474 alpha/beta-Hydrolases b1849 b1849 52440 PreATP-grasp domain b1849 b1849 56059 Glutathione synthetase ATP-binding domain-like b1850 b1850 51569 Aldolase b1852 b1852 51735 NAD(P)-binding Rossmann-fold domains b1852 b1852 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain b1853 b1853 53697 SIS domain b1854 b1854 50800 PK beta-barrel domain-like b1854 b1854 51621 Phosphoenolpyruvate/pyruvate domain b1854 b1854 52935 Pyruvate kinase, C-terminal domain b1856 b1856 54106 LysM domain b1858 b1858 52540 P-loop containing nucleoside triphosphate hydrolases b1859 b1859 81345 ABC transporter involved in vitamin B12 uptake, BtuC b1860 b1860 46785 Winged helix DNA-binding domain b1860 b1860 52540 P-loop containing nucleoside triphosphate hydrolases b1861 b1861 46929 DNA helicase RuvA subunit, C-terminal domain b1861 b1861 47781 RuvA domain 2-like b1861 b1861 50249 Nucleic acid-binding proteins b1863 b1863 53098 Ribonuclease H-like b1864 b1864 75625 YebC-like b1865 b1865 55811 Nudix b1866 b1866 50249 Nucleic acid-binding proteins b1866 b1866 55261 Prokaryotic AspRS, insert domain b1866 b1866 55681 Class II aaRS and biotin synthetases b1867 b1867 52499 Cysteine hydrolase b1870 b1870 53335 S-adenosyl-L-methionine-dependent methyltransferases b1871 b1871 53335 S-adenosyl-L-methionine-dependent methyltransferases b1873 b1873 46626 Cytochrome c b1873 b1873 48695 Multiheme cytochromes b1874 b1874 51366 Ribulose-phoshate binding barrel b1876 b1876 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases b1876 b1876 52374 Nucleotidylyl transferase b1876 b1876 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain b1882 b1882 52172 CheY-like b1883 b1883_1 52172 CheY-like b1883 b1883_2 52738 Methylesterase CheB, C-terminal domain b1884 b1884 47757 Chemotaxis receptor methyltransferase CheR, N-terminal domain b1884 b1884 53335 S-adenosyl-L-methionine-dependent methyltransferases b1885 b1885 47170 Aspartate receptor, ligand-binding domain b1886 b1886 47170 Aspartate receptor, ligand-binding domain b1887 b1887 50341 CheW-like b1888 b1888_1 47226 Histidine-containing phosphotransfer domain, HPT domain b1888 b1888_1 47384 Homodimeric domain of signal transducing histidine kinase b1888 b1888_1 55052 CheY-binding domain of CheA b1888 b1888_1 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b1888 b1888_2 50341 CheW-like b1894 b1894 46689 Homeodomain-like b1895 b1895 52402 Adenine nucleotide alpha hydrolases-like b1896 b1896 53756 UDP-Glycosyltransferase/glycogen phosphorylase b1897 b1897 56784 HAD-like b1900 b1900_1 52540 P-loop containing nucleoside triphosphate hydrolases b1900 b1900_2 52540 P-loop containing nucleoside triphosphate hydrolases b1901 b1901 53822 Periplasmic binding protein-like I b1902 b1902 47240 Ferritin-like b1905 b1905 47240 Ferritin-like b1914 b1914 52172 CheY-like b1916 b1916 46894 C-terminal effector domain of the bipartite response regulators b1916 b1916 75516 Pheromone-binding domain of LuxR-like quorum-sensing transcription factors b1917 b1917 53795 PEP carboxykinase-like b1918 b1918 51989 Cellulases b1920 b1920 53850 Periplasmic binding protein-like II b1921 b1921 47823 lambda integrase-like, N-terminal domain b1923 b1923 64518 F41 fragment of flagellin b1927 b1927 51011 Glycosyl hydrolase domain b1927 b1927 51445 (Trans)glycosidases b1930 b1930 64307 SirA-like b1932 b1932 55729 Acyl-CoA N-acyltransferases (Nat) b1934 b1934 52058 L domain-like b1939 b1939 48029 FliG b1941 b1941 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase b1941 b1941 52540 P-loop containing nucleoside triphosphate hydrolases b1942 b1942 52799 (Phosphotyrosine protein) phosphatases II b1946 b1946 48264 Cytochrome P450 b1951 b1951 46894 C-terminal effector domain of the bipartite response regulators b1955 b1955 56784 HAD-like b1956 b1956 53383 PLP-dependent transferases b1956 b1956 55073 Adenylyl and guanylyl cyclase catalytic domain b1960 b1960 52980 Restriction endonuclease-like b1961 b1961 53335 S-adenosyl-L-methionine-dependent methyltransferases b1965 b1965 56935 Porins b1966 b1966 56935 Porins b1967 b1967 52317 Class I glutamine amidotransferase-like b1968 b1968 47384 Homodimeric domain of signal transducing histidine kinase b1968 b1968 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b1969 b1969 52172 CheY-like b1970 b1970 49472 Transthyretin (prealbumin) b1971 b1971 56524 Sulfite oxidase, middle catalytic domain b1978 b1978 49373 Invasin/intimin cell-adhesion fragments b1982 b1982 53167 Purine and uridine phosphorylases b1983 b1983 75625 YebC-like b1987 b1987 46785 Winged helix DNA-binding domain b1987 b1987 53850 Periplasmic binding protein-like II b1988 b1988 46785 Winged helix DNA-binding domain b1988 b1988 53850 Periplasmic binding protein-like II b1991 b1991 52733 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) b1993 b1993 52540 P-loop containing nucleoside triphosphate hydrolases b1995 b1995 56935 Porins b1996 b1996 53098 Ribonuclease H-like b1997 b1997 46689 Homeodomain-like b1998 b1998 56935 Porins b1999 b1999 52540 P-loop containing nucleoside triphosphate hydrolases b2008 b2008 50129 GroES-like b2009 b2009 55136 Probable bacterial effector-binding domain b2010 b2010 56601 beta-lactamase/transpeptidase-like b2010 b2010 69189 Penicillin-binding protein 5, C-terminal domain b2011 b2011 53098 Ribonuclease H-like b2012 b2012 64307 SirA-like b2016 b2016 51735 NAD(P)-binding Rossmann-fold domains b2019 b2019 53850 Periplasmic binding protein-like II b2019 b2019 54913 GlnB-like b2020 b2020 53720 ALDH-like b2021 b2021 53383 PLP-dependent transferases b2023 b2023 52317 Class I glutamine amidotransferase-like b2024 b2024 51366 Ribulose-phoshate binding barrel b2025 b2025 51366 Ribulose-phoshate binding barrel b2028 b2028 48179 6-phosphogluconate dehydrogenase C-terminal domain-like b2028 b2028 51735 NAD(P)-binding Rossmann-fold domains b2028 b2028 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain b2029 b2029 48179 6-phosphogluconate dehydrogenase C-terminal domain-like b2029 b2029 51735 NAD(P)-binding Rossmann-fold domains b2029a b2029a 53448 Nucleotide-diphospho-sugar transferases b2032 b2032 53756 UDP-Glycosyltransferase/glycogen phosphorylase b2033 b2033 51161 Trimeric LpxA-like enzymes b2036 b2036 51971 Nucleotide-binding domain b2036 b2036 54373 FAD-linked reductases, C-terminal domain b2038 b2038 51182 RmlC-like cupins b2039 b2039 53448 Nucleotide-diphospho-sugar transferases b2040 b2040 51735 NAD(P)-binding Rossmann-fold domains b2041 b2041 51735 NAD(P)-binding Rossmann-fold domains b2042 b2042 53448 Nucleotide-diphospho-sugar transferases b2043 b2043 51126 Pectin lyase-like b2044 b2044 53756 UDP-Glycosyltransferase/glycogen phosphorylase b2048 b2048 53738 Phosphoglucomutase, first 3 domains b2048 b2048 55957 Phosphoglucomutase, C-terminal domain b2049 b2049 51182 RmlC-like cupins b2049 b2049 53448 Nucleotide-diphospho-sugar transferases b2050 b2050 53756 UDP-Glycosyltransferase/glycogen phosphorylase b2051 b2051 55811 Nudix b2052 b2052 51735 NAD(P)-binding Rossmann-fold domains b2053 b2053 51735 NAD(P)-binding Rossmann-fold domains b2054 b2054 51161 Trimeric LpxA-like enzymes b2055 b2055 53448 Nucleotide-diphospho-sugar transferases b2057 b2057 53756 UDP-Glycosyltransferase/glycogen phosphorylase b2058 b2058 51161 Trimeric LpxA-like enzymes b2059 b2059 53448 Nucleotide-diphospho-sugar transferases b2061 b2061 52788 Phosphotyrosine protein phosphatases I b2065 b2065 51283 dUTPase-like b2066 b2066 52540 P-loop containing nucleoside triphosphate hydrolases b2067 b2067 55785 PYP-like sensor domain (PAS domain) b2068 b2068 48150 DNA-glycosylase b2068 b2068 55945 TATA-box binding protein-like b2070 b2070 56112 Protein kinase-like (PK-like) b2072 b2072 81606 Protein serine/threonine phosphatase 2C, catalytic domain b2073 b2073 53300 vWA-like b2074 b2074 51230 Single hybrid motif b2074 b2074 51261 Duplicated hybrid motif b2075 b2075 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains b2075 b2075 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains b2075 b2075 82866 Multidrug efflux transporter AcrB transmembrane domain b2076 b2076 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains b2076 b2076 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains b2076 b2076 82866 Multidrug efflux transporter AcrB transmembrane domain b2078 b2078 47384 Homodimeric domain of signal transducing histidine kinase b2078 b2078 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b2079 b2079 52172 CheY-like b2081 b2081 51690 Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain b2086 b2086 51556 Metallo-dependent hydrolases b2089 b2089 53098 Ribonuclease H-like b2091 b2091 50129 GroES-like b2091 b2091 51735 NAD(P)-binding Rossmann-fold domains b2093 b2093 52794 Enzyme IIB-cellobiose b2094 b2094 55804 Phoshotransferase/anion transport protein b2096 b2096 51569 Aldolase b2100 b2100 53613 Ribokinase-like b2101 b2101 46785 Winged helix DNA-binding domain b2102 b2102 51445 (Trans)glycosidases b2103 b2103 53613 Ribokinase-like b2104 b2104 53613 Ribokinase-like b2108 b2108 49401 Bacterial adhesins b2110 b2110 49354 PapD-like b2110 b2110 49584 Periplasmic chaperone C-domain b2111 b2111 49401 Bacterial adhesins b2114 b2114 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases b2114 b2114 50249 Nucleic acid-binding proteins b2114 b2114 52374 Nucleotidylyl transferase b2114 b2114 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain b2119 b2119 52540 P-loop containing nucleoside triphosphate hydrolases b2120 b2120 47266 4-helical cytokines b2121 b2121 53300 vWA-like b2126 b2126 55781 GAF domain-like b2126 b2126 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b2127 b2127 46955 Putative DNA-binding domain b2129 b2129 53795 PEP carboxykinase-like b2129 b2129 54631 CBS-domain b2132 b2132 51445 (Trans)glycosidases b2132 b2132 52279 Beta-D-glucan exohydrolase, C-terminal domain b2133 b2133 55103 FAD-linked oxidases, C-terminal domain b2133 b2133 56176 FAD-binding domain b2134 b2134 56601 beta-lactamase/transpeptidase-like b2137 b2137 51735 NAD(P)-binding Rossmann-fold domains b2137a b2137a 51735 NAD(P)-binding Rossmann-fold domains b2138 b2138 56954 Integral outer membrane protein TolC, efflux pump component b2140 b2140 51395 FMN-linked oxidoreductases b2143 b2143 53927 Cytidine deaminase-like b2146 b2146 46548 alpha-helical ferredoxin b2146 b2146 51971 Nucleotide-binding domain b2149 b2149_1 52540 P-loop containing nucleoside triphosphate hydrolases b2150 b2150 53822 Periplasmic binding protein-like I b2151 b2151 47413 lambda repressor-like DNA-binding domains b2151 b2151 53822 Periplasmic binding protein-like I b2153 b2153 55620 Tetrahydrobiopterin biosynthesis enzymes-like b2154 b2154 53474 alpha/beta-Hydrolases b2155 b2155 56935 Porins b2156 b2156 53187 Zn-dependent exopeptidases b2157 b2157 46785 Winged helix DNA-binding domain b2157 b2157 53850 Periplasmic binding protein-like II b2159 b2159 51658 Xylose isomerase-like b2160 b2160 46785 Winged helix DNA-binding domain b2160 b2160 53613 Ribokinase-like b2162 b2162 53590 Nucleoside hydrolase b2166 b2166 53613 Ribokinase-like b2168 b2168 53613 Ribokinase-like b2169 b2169_1 55804 Phoshotransferase/anion transport protein b2169 b2169_2 55594 HPr-like b2169 b2169_2 55804 Phoshotransferase/anion transport protein b2172 b2172 48179 6-phosphogluconate dehydrogenase C-terminal domain-like b2172 b2172 51735 NAD(P)-binding Rossmann-fold domains b2173 b2173 52540 P-loop containing nucleoside triphosphate hydrolases b2178 b2178 69047 Hypothetical protein YjbJ b2180 b2180_1 52540 P-loop containing nucleoside triphosphate hydrolases b2180 b2180_2 52540 P-loop containing nucleoside triphosphate hydrolases b2183 b2183 55120 Pseudouridine synthase b2183 b2183 55174 Alpha-L RNA-binding motif b2184 b2184 52540 P-loop containing nucleoside triphosphate hydrolases b2185 b2185 50715 Ribosomal protein L25-like b2188 b2188 53649 Alkaline phosphatase-like b2190 b2190 51126 Pectin lyase-like b2193 b2193 52172 CheY-like b2194 b2194 48452 TPR-like b2195 b2195 52833 Thioredoxin-like b2197 b2197 82093 Heme chaperone CcmE b2199 b2199 49611 b2201 b2201 53795 PEP carboxykinase-like b2202 b2202 48695 Multiheme cytochromes b2204 b2204 54862 4Fe-4S ferredoxins b2205 b2205 54862 4Fe-4S ferredoxins b2206 b2206 50692 ADC-like b2206 b2206 53706 Formate dehydrogenase/DMSO reductase, domains 1-3 b2208 b2208 54862 4Fe-4S ferredoxins b2209 b2209 49772 Ecotin, trypsin inhibitor b2210 b2210 51905 FAD/NAD(P)-binding domain b2211 b2211_2 52540 P-loop containing nucleoside triphosphate hydrolases b2213 b2213_1 46689 Homeodomain-like b2213 b2213_1 57884 Ada DNA repair protein, N-terminal domain (N-Ada 10) b2213 b2213_2 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain b2213 b2213_2 53155 Methylated DNA-protein cysteine methyltransferase domain b2215 b2215 56935 Porins b2216 b2216 47226 Histidine-containing phosphotransfer domain, HPT domain b2216 b2216 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b2217 b2217 52172 CheY-like b2218 b2218_1 47384 Homodimeric domain of signal transducing histidine kinase b2218 b2218_1 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b2218 b2218_2 52172 CheY-like b2219 b2219 47384 Homodimeric domain of signal transducing histidine kinase b2219 b2219 55785 PYP-like sensor domain (PAS domain) b2219 b2219 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b2220 b2220_1 52172 CheY-like b2220 b2220_2 46689 Homeodomain-like b2220 b2220_2 52540 P-loop containing nucleoside triphosphate hydrolases b2221 b2221 53316 CoA transferase b2222 b2222 53316 CoA transferase b2224 b2224 53901 Thiolase-like b2226 b2226 56601 beta-lactamase/transpeptidase-like b2231 b2231 56719 Type II DNA topoisomerase b2232 b2232 53335 S-adenosyl-L-methionine-dependent methyltransferases b2233 b2233 51126 Pectin lyase-like b2233 b2233 56925 OMPA-like b2234 b2234 48168 R1 subunit of ribonucleotide reductase, N-terminal domain b2234 b2234 51998 PFL-like glycyl radical enzymes b2235 b2235 47240 Ferritin-like b2236 b2236 54292 2Fe-2S ferredoxin-like b2237 b2237 56112 Protein kinase-like (PK-like) b2238 b2238 53850 Periplasmic binding protein-like II b2239 b2239 51695 PLC-like phosphodiesterases b2241 b2241 51905 FAD/NAD(P)-binding domain b2242 b2242 51905 FAD/NAD(P)-binding domain b2243 b2243 46548 alpha-helical ferredoxin b2244 b2244 48452 TPR-like b2245 b2245 51621 Phosphoenolpyruvate/pyruvate domain b2247 b2247 51604 Enolase C-terminal domain-like b2247 b2247 54826 Enolase N-terminal domain-like b2248 b2248 46785 Winged helix DNA-binding domain b2248 b2248 55781 GAF domain-like b2249 b2249 53218 Molybdenum cofactor biosynthesis proteins b2251 b2251 55811 Nudix b2252 b2252 53254 Phosphoglycerate mutase-like b2254 b2254 53448 Nucleotide-diphospho-sugar transferases b2255 b2255_1 50486 FMT C-terminal domain-like b2255 b2255_1 53328 Formyltransferase b2255 b2255_2 51735 NAD(P)-binding Rossmann-fold domains b2260 b2260 56801 Acetyl-CoA synthetase-like b2261 b2261 51604 Enolase C-terminal domain-like b2261 b2261 54826 Enolase N-terminal domain-like b2262 b2262 52096 ClpP/crotonase b2263 b2263 53474 alpha/beta-Hydrolases b2264 b2264 52518 Thiamin diphosphate-binding fold (THDP-binding) b2267 b2267 55729 Acyl-CoA N-acyltransferases (Nat) b2269 b2269 54001 Cysteine proteinases b2270 b2270 53300 vWA-like b2271 b2271 53187 Zn-dependent exopeptidases b2275 b2275 48452 TPR-like b2281 b2281 46548 alpha-helical ferredoxin b2285 b2285 52833 Thioredoxin-like b2286 b2286 50203 Bacterial enterotoxins b2286 b2286 56762 Nickel-iron hydrogenase, large subunit b2287 b2287 56770 Nickel-iron hydrogenase, small subunit b2289 b2289 46785 Winged helix DNA-binding domain b2289 b2289 53850 Periplasmic binding protein-like II b2290 b2290 53383 PLP-dependent transferases b2292 b2292 51735 NAD(P)-binding Rossmann-fold domains b2293 b2293 56784 HAD-like b2296 b2296 53067 Actin-like ATPase domain b2297 b2297 52540 P-loop containing nucleoside triphosphate hydrolases b2297 b2297 75138 HPr kinase/phoshatase HprK N-terminal domain b2299 b2299 55811 Nudix b2301 b2301 47616 Glutathione S-transferase (GST), C-terminal domain b2301 b2301 52833 Thioredoxin-like b2302 b2302 47616 Glutathione S-transferase (GST), C-terminal domain b2302 b2302 52833 Thioredoxin-like b2303 b2303 55620 Tetrahydrobiopterin biosynthesis enzymes-like b2304 b2304 51735 NAD(P)-binding Rossmann-fold domains b2305 b2305 48452 TPR-like b2306 b2306 52540 P-loop containing nucleoside triphosphate hydrolases b2309 b2309 53850 Periplasmic binding protein-like II b2310 b2310 53850 Periplasmic binding protein-like II b2311 b2311 52507 DFP DNA/pantothenate metabolism flavoprotein b2312 b2312 53271 PRTase-like b2312 b2312 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases) b2315 b2315 53244 MurD-like peptide ligases, peptide-binding domain b2315 b2315 53623 MurD-like peptide ligases, catalytic domain b2316 b2316 53933 Microbial ribonucleases b2316 b2316 57783 Zinc beta-ribbon b2318 b2318 55120 Pseudouridine synthase b2319 b2319 51735 NAD(P)-binding Rossmann-fold domains b2319 b2319 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain b2320 b2320 51735 NAD(P)-binding Rossmann-fold domains b2320 b2320 52283 Formate/glycerate dehydrogenase catalytic domain-like b2323 b2323 53901 Thiolase-like b2333 b2333 49401 Bacterial adhesins b2334 b2334 49401 Bacterial adhesins b2335 b2335 49401 Bacterial adhesins b2336 b2336 49354 PapD-like b2336 b2336 49584 Periplasmic chaperone C-domain b2339 b2339 49401 Bacterial adhesins b2340 b2340 53254 Phosphoglycerate mutase-like b2341 b2341_1 52096 ClpP/crotonase b2341 b2341_2 48179 6-phosphogluconate dehydrogenase C-terminal domain-like b2341 b2341_2 51735 NAD(P)-binding Rossmann-fold domains b2342 b2342 53901 Thiolase-like b2344 b2344 56935 Porins b2349 b2349 56349 DNA breaking-rejoining enzymes b2351 b2351 53448 Nucleotide-diphospho-sugar transferases b2357 b2357 46785 Winged helix DNA-binding domain b2364 b2364 46785 Winged helix DNA-binding domain b2364 b2364 53850 Periplasmic binding protein-like II b2366 b2366 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes b2368 b2368 51230 Single hybrid motif b2369 b2369 52172 CheY-like b2370 b2370_1 53850 Periplasmic binding protein-like II b2370 b2370_1 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b2370 b2370_2 47226 Histidine-containing phosphotransfer domain, HPT domain b2370 b2370_2 52172 CheY-like b2373 b2373 52467 DHS-like NAD/FAD-binding domain b2373 b2373 52518 Thiamin diphosphate-binding fold (THDP-binding) b2374 b2374 51735 NAD(P)-binding Rossmann-fold domains b2379 b2379 53383 PLP-dependent transferases b2380 b2380 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b2381 b2381 52172 CheY-like b2382 b2382 46689 Homeodomain-like b2382 b2382 51182 RmlC-like cupins b2383 b2383_1 55594 HPr-like b2383 b2383_2 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain b2383 b2383_2 51621 Phosphoenolpyruvate/pyruvate domain b2383 b2383_2 52009 Phosphohistidine domain b2383 b2383_3 55804 Phoshotransferase/anion transport protein b2384 b2384 53187 Zn-dependent exopeptidases b2385 b2385 55920 Creatinase/aminopeptidase b2388 b2388 53067 Actin-like ATPase domain b2389 b2389 81340 Clc chloride channel b2390 b2390 51182 RmlC-like cupins b2394 b2394 53098 Ribonuclease H-like b2398 b2398 46785 Winged helix DNA-binding domain b2399 b2399 46785 Winged helix DNA-binding domain b2400 b2400 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases b2400 b2400 52374 Nucleotidylyl transferase b2405 b2405 46785 Winged helix DNA-binding domain b2405 b2405 53850 Periplasmic binding protein-like II b2407 b2407 53167 Purine and uridine phosphorylases b2409 b2409 46785 Winged helix DNA-binding domain b2409 b2409 53850 Periplasmic binding protein-like II b2411 b2411 47781 RuvA domain 2-like b2411 b2411 50249 Nucleic acid-binding proteins b2411 b2411 52113 BRCT domain b2411 b2411 56091 DNA ligase/mRNA capping enzyme, catalytic domain b2412 b2412 64383 Cell-division protein ZipA, C-terminal domain b2414 b2414 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes b2415 b2415 55594 HPr-like b2416 b2416 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain b2416 b2416 51621 Phosphoenolpyruvate/pyruvate domain b2416 b2416 52009 Phosphohistidine domain b2417 b2417 51261 Duplicated hybrid motif b2418 b2418 53613 Ribokinase-like b2421 b2421 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes b2422 b2422 53795 PEP carboxykinase-like b2425 b2425 53850 Periplasmic binding protein-like II b2427 b2427 53697 SIS domain b2428 b2428 53697 SIS domain b2429 b2429 55604 Glucose permease domain IIB b2430 b2430 56601 beta-lactamase/transpeptidase-like b2432 b2432 56762 Nickel-iron hydrogenase, large subunit b2437 b2437 46689 Homeodomain-like b2442 b2442 47823 lambda integrase-like, N-terminal domain b2442 b2442 56349 DNA breaking-rejoining enzymes b2450 b2450 47413 lambda repressor-like DNA-binding domains b2451 b2451 53067 Actin-like ATPase domain b2454 b2454 53067 Actin-like ATPase domain b2455 b2455 53720 ALDH-like b2460 b2460 51182 RmlC-like cupins b2461 b2461 52540 P-loop containing nucleoside triphosphate hydrolases b2463 b2463_1 51735 NAD(P)-binding Rossmann-fold domains b2463 b2463_1 53223 Aminoacid dehydrogenase-like, N-terminal domain b2464 b2464 51569 Aldolase b2465 b2465 52518 Thiamin diphosphate-binding fold (THDP-binding) b2465 b2465 52922 TK C-terminal domain-like b2467 b2467 55811 Nudix b2468 b2468_1 54862 4Fe-4S ferredoxins b2468 b2468_2 46548 alpha-helical ferredoxin b2468 b2468_2 51971 Nucleotide-binding domain b2469 b2469 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b2470 b2470 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains b2470 b2470 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains b2470 b2470 82866 Multidrug efflux transporter AcrB transmembrane domain b2471 b2471 52833 Thioredoxin-like b2472 b2472 53187 Zn-dependent exopeptidases b2472 b2472 55031 Bacterial exopeptidase dimerisation domain b2473 b2473 53474 alpha/beta-Hydrolases b2474 b2474 52540 P-loop containing nucleoside triphosphate hydrolases b2474 b2474 55729 Acyl-CoA N-acyltransferases (Nat) b2476 b2476 56104 SAICAR synthase-like b2478 b2478 51569 Aldolase b2480 b2480 52833 Thioredoxin-like b2487 b2487 50203 Bacterial enterotoxins b2487 b2487 56762 Nickel-iron hydrogenase, large subunit b2488 b2488 54862 4Fe-4S ferredoxins b2489 b2489 56770 Nickel-iron hydrogenase, small subunit b2494 b2494 48452 TPR-like b2494 b2494 55486 Metalloproteases (zincins), catalytic doma b2495 b2495 52833 Thioredoxin-like b2496 b2496 52540 P-loop containing nucleoside triphosphate hydrolases b2498 b2498 53271 PRTase-like b2499 b2499 55326 Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain b2499 b2499 56042 Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain b2500 b2500 53328 Formyltransferase b2501 b2501 56024 Phospholipase D/nuclease b2502 b2502 53067 Actin-like ATPase domain b2503 b2503 48619 Phospholipase A2, PLA2 b2507 b2507 52317 Class I glutamine amidotransferase-like b2507 b2507 52402 Adenine nucleotide alpha hydrolases-like b2507 b2507 54810 GMP synthetase C-terminal dimerisation domain b2508 b2508 51412 Inosine monophosphate dehydrogenase (IMPDH) b2508 b2508 54631 CBS-domain b2509 b2509 50249 Nucleic acid-binding proteins b2509 b2509 51569 Aldolase b2511 b2511 52540 P-loop containing nucleoside triphosphate hydrolases b2512 b2512 50998 Quinoprotein alcohol dehydrogenase-like b2513 b2513 48452 TPR-like b2514 b2514 52954 Anticodon-binding domain of Class II aaRS b2514 b2514 55681 Class II aaRS and biotin synthetases b2515 b2515 51604 Enolase C-terminal domain-like b2515 b2515 56014 Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 b2516 b2516 47413 lambda repressor-like DNA-binding domains b2518 b2518 54919 Nucleoside diphosphate kinases b2519 b2519_2 56601 beta-lactamase/transpeptidase-like b2520 b2520 48239 Terpenoid cylases/Protein prenyltransferases b2525 b2525 54292 2Fe-2S ferredoxin-like b2526 b2526 53067 Actin-like ATPase domain b2526 b2526 56778 Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment b2527 b2527 46565 Chaperone J-domain b2527 b2527 47144 HSC20 (HSCB), C-terminal oligomerisation domain b2531 b2531 46785 Winged helix DNA-binding domain b2532 b2532 75217 alpha/beta knot b2533 b2533 56655 Carbohydrate phosphatase b2535 b2535 63520 PTS-regulatory domain, PRD b2537 b2537 46785 Winged helix DNA-binding domain b2537 b2537 53850 Periplasmic binding protein-like II b2538 b2538 50022 ISP domain b2538 b2538 55961 Bet v1-like b2539 b2539 54427 NTF2-like b2540 b2540 50022 ISP domain b2541 b2541 51735 NAD(P)-binding Rossmann-fold domains b2542 b2542 51905 FAD/NAD(P)-binding domain b2544 b2544 74650 Galactose mutarotase-like b2545 b2545 50129 GroES-like b2545 b2545 51735 NAD(P)-binding Rossmann-fold domains b2546 b2546 81345 ABC transporter involved in vitamin B12 uptake, BtuC b2547 b2547_1 52540 P-loop containing nucleoside triphosphate hydrolases b2547 b2547_2 52540 P-loop containing nucleoside triphosphate hydrolases b2548 b2548 53822 Periplasmic binding protein-like I b2549 b2549 48452 TPR-like b2551 b2551 53383 PLP-dependent transferases b2552 b2552_1 46458 Globin-like b2552 b2552_2 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain b2552 b2552_2 63380 Riboflavin synthase domain-like b2553 b2553 54913 GlnB-like b2554 b2554_1 52172 CheY-like b2554 b2554_2 52540 P-loop containing nucleoside triphosphate hydrolases b2556 b2556 47384 Homodimeric domain of signal transducing histidine kinase b2556 b2556 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b2557 b2557 52317 Class I glutamine amidotransferase-like b2557 b2557 56042 Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain b2558 b2558 53850 Periplasmic binding protein-like II b2558 b2558 53955 Lysozyme-like b2559 b2559 53927 Cytidine deaminase-like b2561 b2561 53697 SIS domain b2562 b2562 54862 4Fe-4S ferredoxins b2563 b2563 56214 4'-phosphopantetheinyl transferase b2564 b2564 63892 Pyridoxine 5'-phosphate synthase b2566 b2566 52540 P-loop containing nucleoside triphosphate hydrolases b2566 b2566 54814 Prokaryotic type KH domain (KH-domain type II) b2567 b2567 54768 dsRNA-binding domain-like b2567 b2567 69065 RNase III endonuclease catalytic domain b2568 b2568 51306 LexA/Signal peptidase b2569 b2569 52540 P-loop containing nucleoside triphosphate hydrolases b2569 b2569 54980 EF-G/eEF-2 domains III and V b2573 b2573 48329 b2574 b2574 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain b2574 b2574 51905 FAD/NAD(P)-binding domain b2574 b2574 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain b2575 b2575 53335 S-adenosyl-L-methionine-dependent methyltransferases b2576 b2576 52540 P-loop containing nucleoside triphosphate hydrolases b2579 b2579 51998 PFL-like glycyl radical enzymes b2580 b2580 52141 DNA glycosylase b2581 b2581 55315 L30e-like b2581 b2581 75217 alpha/beta knot b2582 b2582 52833 Thioredoxin-like b2584 b2584_1 51735 NAD(P)-binding Rossmann-fold domains b2584 b2584_1 52210 Succinyl-CoA synthetase domains b2584 b2584_2 55729 Acyl-CoA N-acyltransferases (Nat) b2584 b2584_2 56059 Glutathione synthetase ATP-binding domain-like b2592 b2592 52540 P-loop containing nucleoside triphosphate hydrolases b2592 b2592 81923 Double Clp-N motif b2594 b2594 55120 Pseudouridine synthase b2594 b2594 55174 Alpha-L RNA-binding motif b2595 b2595 48452 TPR-like b2597 b2597 69754 Ribosome binding protein Y (YfiA homologue) b2599 b2599_1 48600 Chorismate mutase II b2599 b2599_2 55021 Regulatory domain in the aminoacid metabolism b2600 b2600_1 48600 Chorismate mutase II b2600 b2600_2 51735 NAD(P)-binding Rossmann-fold domains b2601 b2601 51569 Aldolase b2609 b2609 54565 Ribosomal protein S16 b2610 b2610 47364 Domain of the SRP/SRP receptor G-proteins b2610 b2610 47446 Signal peptide-binding domain b2610 b2610 52540 P-loop containing nucleoside triphosphate hydrolases b2614 b2614 51064 Head domain of nucleotide exchange factor GrpE b2616 b2616 52540 P-loop containing nucleoside triphosphate hydrolases b2619 b2619 55961 Bet v1-like b2620 b2620 74982 Small protein B (SmpB) b2622 b2622 56349 DNA breaking-rejoining enzymes b2627 b2627 52540 P-loop containing nucleoside triphosphate hydrolases b2634 b2634 46785 Winged helix DNA-binding domain b2638 b2638 52833 Thioredoxin-like b2647 b2647 51126 Pectin lyase-like b2647 b2647 56925 OMPA-like b2656 b2656 51445 (Trans)glycosidases b2657 b2657 51445 (Trans)glycosidases b2658 b2658 51011 Glycosyl hydrolase domain b2660 b2660 51905 FAD/NAD(P)-binding domain b2661 b2661 53720 ALDH-like b2662 b2662 53383 PLP-dependent transferases b2665 b2665 54106 LysM domain b2667 b2667 46785 Winged helix DNA-binding domain b2668 b2668 52821 Rhodanese/Cell cycle control phosphatase b2669 b2669 81273 H-NS histone-like proteins b2673 b2673 52833 Thioredoxin-like b2674 b2674 52218 Flavoproteins b2675 b2675 48168 R1 subunit of ribonucleotide reductase, N-terminal domain b2675 b2675 51998 PFL-like glycyl radical enzymes b2676 b2676 47240 Ferritin-like b2677 b2677 53795 PEP carboxykinase-like b2677 b2677 54631 CBS-domain b2679 b2679 53850 Periplasmic binding protein-like II b2684 b2684 46785 Winged helix DNA-binding domain b2685 b2685 51230 Single hybrid motif b2687 b2687 63411 LuxS/MPP-like metallohydrolase b2690 b2690 56784 HAD-like b2697 b2697 55186 Threonyl-tRNA synthetase (ThrRS), second 'additional' domain b2697 b2697 55681 Class II aaRS and biotin synthetases b2699 b2699 52540 P-loop containing nucleoside triphosphate hydrolases b2699 b2699 54752 RecA protein, C-terminal domain b2701 b2701 53955 Lysozyme-like b2705 b2705 51735 NAD(P)-binding Rossmann-fold domains b2707 b2707 46785 Winged helix DNA-binding domain b2707 b2707 52512 Phosphosugar isomerase b2709 b2709 52540 P-loop containing nucleoside triphosphate hydrolases b2709 b2709 55781 GAF domain-like b2710 b2710 52218 Flavoproteins b2710 b2710 56281 Metallo-hydrolase/oxidoreductase b2710 b2710 57802 Rubredoxin-like b2711 b2711 51905 FAD/NAD(P)-binding domain b2712 b2712 53067 Actin-like ATPase domain b2712 b2712 54975 Acylphosphatase-like b2712 b2712 55821 YrdC/RibB b2712 b2712 63393 RBP12 subunit of RNA polymerase II b2713 b2713 54862 4Fe-4S ferredoxins b2714 b2714 47413 lambda repressor-like DNA-binding domains b2714 b2714 53822 Periplasmic binding protein-like I b2715 b2715 55604 Glucose permease domain IIB b2716 b2716 51445 (Trans)glycosidases b2717 b2717 53163 HybD-like b2719 b2719 56770 Nickel-iron hydrogenase, small subunit b2720 b2720 54862 4Fe-4S ferredoxins b2721 b2721 50203 Bacterial enterotoxins b2721 b2721 56762 Nickel-iron hydrogenase, large subunit b2724 b2724 54862 4Fe-4S ferredoxins b2727 b2727 46785 Winged helix DNA-binding domain b2727 b2727 52540 P-loop containing nucleoside triphosphate hydrolases b2728 b2728 50249 Nucleic acid-binding proteins b2730 b2730 55326 Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain b2730 b2730 56042 Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain b2731 b2731 48283 FIS-like b2731 b2731 52540 P-loop containing nucleoside triphosphate hydrolases b2731 b2731 55781 GAF domain-like b2733 b2733 48334 DNA repair protein MutS, domain III b2733 b2733 52540 P-loop containing nucleoside triphosphate hydrolases b2733 b2733 53150 DNA repair protein MutS, domain II b2733 b2733 55271 DNA repair protein MutS, domain I b2734 b2734 56300 Metallo-dependent phosphatases b2735 b2735 46785 Winged helix DNA-binding domain b2735 b2735 52512 Phosphosugar isomerase b2736 b2736 51735 NAD(P)-binding Rossmann-fold domains b2738 b2738 53639 AraD-like aldolase/epimerase b2739 b2739 51658 Xylose isomerase-like b2741 b2741 48329 b2742 b2742 54106 LysM domain b2743 b2743 53335 S-adenosyl-L-methionine-dependent methyltransferases b2744 b2744 64167 SurE-like b2746 b2746 69765 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF b2747 b2747 53448 Nucleotide-diphospho-sugar transferases b2750 b2750 52540 P-loop containing nucleoside triphosphate hydrolases b2751 b2751 50447 Translation proteins b2751 b2751 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain b2751 b2751 52540 P-loop containing nucleoside triphosphate hydrolases b2752 b2752 52402 Adenine nucleotide alpha hydrolases-like b2753 b2753 53187 Zn-dependent exopeptidases b2761 b2761 52540 P-loop containing nucleoside triphosphate hydrolases b2762 b2762 52402 Adenine nucleotide alpha hydrolases-like b2763 b2763 55124 Sulfite reductase, domains 1 and 3 b2763 b2763 56014 Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 b2764 b2764 52218 Flavoproteins b2764 b2764 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain b2764 b2764 63380 Riboflavin synthase domain-like b2765 b2765 55620 Tetrahydrobiopterin biosynthesis enzymes-like b2767 b2767 54862 4Fe-4S ferredoxins b2768 b2768 51395 FMN-linked oxidoreductases b2772 b2772 55103 FAD-linked oxidases, C-terminal domain b2773 b2773 56176 FAD-binding domain b2776 b2776 53067 Actin-like ATPase domain b2779 b2779 51604 Enolase C-terminal domain-like b2779 b2779 54826 Enolase N-terminal domain-like b2780 b2780 52317 Class I glutamine amidotransferase-like b2780 b2780 52540 P-loop containing nucleoside triphosphate hydrolases b2781 b2781 47986 DEATH domain b2782 b2782 50118 Cell growth inhibitor/plasmid maintainance toxic component b2783 b2783 54742 Transcription-state regulator AbrB, the N-terminal DNA recognition domain b2784 b2784 48019 DNA polymerase III clamp loader subunits, C-terminal domain b2784 b2784 81271 TGS-like b2785 b2785 53335 S-adenosyl-L-methionine-dependent methyltransferases b2786 b2786_1 47384 Homodimeric domain of signal transducing histidine kinase b2786 b2786_1 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b2786 b2786_2 47226 Histidine-containing phosphotransfer domain, HPT domain b2786 b2786_2 52172 CheY-like b2787 b2787 51604 Enolase C-terminal domain-like b2787 b2787 54826 Enolase N-terminal domain-like b2788 b2788 51604 Enolase C-terminal domain-like b2788 b2788 54826 Enolase N-terminal domain-like b2790 b2790 52218 Flavoproteins b2791 b2791 55120 Pseudouridine synthase b2794 b2794 55620 Tetrahydrobiopterin biosynthesis enzymes-like b2799 b2799 56796 Dehydroquinate synthase-like b2800 b2800 53639 AraD-like aldolase/epimerase b2802 b2802 50443 L-fucose isomerase, C-terminal domain b2802 b2802 53743 L-fucose isomerase, N-terminal and second domains b2803 b2803 53067 Actin-like ATPase domain b2805 b2805 46785 Winged helix DNA-binding domain b2805 b2805 52512 Phosphosugar isomerase b2806 b2806 53335 S-adenosyl-L-methionine-dependent methyltransferases b2808 b2808 46785 Winged helix DNA-binding domain b2808 b2808 53850 Periplasmic binding protein-like II b2810 b2810 53383 PLP-dependent transferases b2811 b2811 82649 SufE-like b2812 b2812 69572 Activating enzymes of the ubiquitin-like proteins b2818 b2818_1 53633 Carbamate kinase-like b2818 b2818_2 55729 Acyl-CoA N-acyltransferases (Nat) b2819 b2819 52540 P-loop containing nucleoside triphosphate hydrolases b2820 b2820 52540 P-loop containing nucleoside triphosphate hydrolases b2821 b2821 63411 LuxS/MPP-like metallohydrolase b2822 b2822 52540 P-loop containing nucleoside triphosphate hydrolases b2825 b2825 54523 Pili subunits b2826 b2826 54523 Pili subunits b2827 b2827 55831 Thymidylate synthase/dCMP hydroxymethylase b2829 b2829_1 55781 GAF domain-like b2829 b2829_2 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain b2829 b2829_2 51621 Phosphoenolpyruvate/pyruvate domain b2829 b2829_2 52009 Phosphohistidine domain b2830 b2830 55811 Nudix b2831 b2831 52980 Restriction endonuclease-like b2834 b2834 51430 NAD(P)-linked oxidoreductase b2836 b2836_2 56801 Acetyl-CoA synthetase-like b2837 b2837 47413 lambda repressor-like DNA-binding domains b2837 b2837 53822 Periplasmic binding protein-like I b2838 b2838 50621 Alanine racemase C-terminal domain-like b2838 b2838 51419 PLP-binding barrel b2839 b2839 46785 Winged helix DNA-binding domain b2839 b2839 53850 Periplasmic binding protein-like II b2840 b2840 53681 Aspartate/glutamate racemase b2842 b2842 51735 NAD(P)-binding Rossmann-fold domains b2844 b2844 53901 Thiolase-like b2846 b2846 46894 C-terminal effector domain of the bipartite response regulators b2847 b2847 46894 C-terminal effector domain of the bipartite response regulators b2851 b2851 48452 TPR-like b2852 b2852 46894 C-terminal effector domain of the bipartite response regulators b2852 b2852 48452 TPR-like b2854 b2854 53955 Lysozyme-like b2855 b2855 46894 C-terminal effector domain of the bipartite response regulators b2855 b2855 52172 CheY-like b2860 b2860 53098 Ribonuclease H-like b2861 b2861 46689 Homeodomain-like b2863 b2863 48208 Six-hairpin glycosyltransferases b2866 b2866 54665 CO dehydrogenase molybdoprotein N-domain-like b2866 b2866 56003 Molybdemum cofactor-binding domain b2867 b2867 55447 CO dehydrogenase flavoprotein C-terminal domain-like b2867 b2867 56176 FAD-binding domain b2868 b2868 47741 CO dehydrogenase ISP C-domain like b2868 b2868 54292 2Fe-2S ferredoxin-like b2869 b2869 48283 FIS-like b2869 b2869 52540 P-loop containing nucleoside triphosphate hydrolases b2869 b2869 55781 GAF domain-like b2870 b2870 53671 Aspartate/ornithine carbamoyltransferase b2871 b2871 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes b2872 b2872 53187 Zn-dependent exopeptidases b2872 b2872 55031 Bacterial exopeptidase dimerisation domain b2874 b2874 53633 Carbamate kinase-like b2875 b2875 51735 NAD(P)-binding Rossmann-fold domains b2875 b2875 51905 FAD/NAD(P)-binding domain b2876 b2876 52540 P-loop containing nucleoside triphosphate hydrolases b2876 b2876 53623 MurD-like peptide ligases, catalytic domain b2877 b2877 53448 Nucleotide-diphospho-sugar transferases b2878 b2878 51395 FMN-linked oxidoreductases b2878 b2878 51905 FAD/NAD(P)-binding domain b2878 b2878 54862 4Fe-4S ferredoxins b2880 b2880 55447 CO dehydrogenase flavoprotein C-terminal domain-like b2880 b2880 56176 FAD-binding domain b2881 b2881_1 47741 CO dehydrogenase ISP C-domain like b2881 b2881_1 54292 2Fe-2S ferredoxin-like b2881 b2881_2 54665 CO dehydrogenase molybdoprotein N-domain-like b2881 b2881_2 56003 Molybdemum cofactor-binding domain b2883 b2883 51338 Composite domain of metallo-dependent hydrolases b2883 b2883 51556 Metallo-dependent hydrolases b2887 b2887_1 54862 4Fe-4S ferredoxins b2887 b2887_2 51971 Nucleotide-binding domain b2887 b2887_2 54862 4Fe-4S ferredoxins b2889 b2889 55811 Nudix b2890 b2890 50249 Nucleic acid-binding proteins b2890 b2890 55681 Class II aaRS and biotin synthetases b2891 b2891 75620 Polypeptide chain release factor 2 (RF2) b2892 b2892 64182 DHH phosphoesterases b2893 b2893 52833 Thioredoxin-like b2893 b2893 54423 Disulfide bond isomerase, DsbC, N-terminal domain b2894 b2894 47823 lambda integrase-like, N-terminal domain b2894 b2894 56349 DNA breaking-rejoining enzymes b2895 b2895 52218 Flavoproteins b2901 b2901 51445 (Trans)glycosidases b2902 b2902 51735 NAD(P)-binding Rossmann-fold domains b2903 b2903 53383 PLP-dependent transferases b2904 b2904 51230 Single hybrid motif b2905 b2905 55920 Creatinase/aminopeptidase b2906 b2906 51905 FAD/NAD(P)-binding domain b2907 b2907 51905 FAD/NAD(P)-binding domain b2908 b2908 53092 Creatinase/prolidase N-terminal domain b2908 b2908 55920 Creatinase/aminopeptidase b2913 b2913 51735 NAD(P)-binding Rossmann-fold domains b2913 b2913 52283 Formate/glycerate dehydrogenase catalytic domain-like b2913 b2913 55021 Regulatory domain in the aminoacid metabolism b2914 b2914 52512 Phosphosugar isomerase b2914 b2914 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain b2915 b2915 53850 Periplasmic binding protein-like II b2916 b2916 46785 Winged helix DNA-binding domain b2916 b2916 53850 Periplasmic binding protein-like II b2917 b2917 51703 Cobalamin (vitamin B12)-dependent enzymes b2917 b2917 52242 Cobalamin (vitamin B12)-binding domain b2918 b2918 52540 P-loop containing nucleoside triphosphate hydrolases b2920 b2920 53316 CoA transferase b2924 b2924 50182 Sm-like ribonucleoproteins b2924 b2924 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain b2924 b2924 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region b2925 b2925 51569 Aldolase b2926 b2926 53748 Phosphoglycerate kinase b2927 b2927 51735 NAD(P)-binding Rossmann-fold domains b2927 b2927 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain b2928 b2928 52540 P-loop containing nucleoside triphosphate hydrolases b2931 b2931 50129 GroES-like b2931 b2931 51735 NAD(P)-binding Rossmann-fold domains b2931 b2931 52733 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) b2932 b2932 50129 GroES-like b2933 b2933 52794 Enzyme IIB-cellobiose b2934 b2934 55804 Phoshotransferase/anion transport protein b2935 b2935 52518 Thiamin diphosphate-binding fold (THDP-binding) b2935 b2935 52922 TK C-terminal domain-like b2937 b2937 52768 Arginase/deacetylase b2938 b2938 51419 PLP-binding barrel b2942 b2942 55973 S-adenosylmethionine synthetase b2947 b2947 52440 PreATP-grasp domain b2947 b2947 56059 Glutathione synthetase ATP-binding domain-like b2949 b2949 53098 Ribonuclease H-like b2950 b2950 52540 P-loop containing nucleoside triphosphate hydrolases b2951 b2951 51419 PLP-binding barrel b2953 b2953 69786 YggU-like b2954 b2954 52972 Maf/Ham1 b2957 b2957 53774 Glutaminase/Asparaginase b2960 b2960 53335 S-adenosyl-L-methionine-dependent methyltransferases b2961 b2961 48150 DNA-glycosylase b2963 b2963 53955 Lysozyme-like b2970 b2970 50156 PDZ domain-like b2973 b2973 46626 Cytochrome c b2976 b2976 51645 Malate synthase G b2978 b2978_1 55103 FAD-linked oxidases, C-terminal domain b2978 b2978_1 56176 FAD-binding domain b2978 b2978_2 46548 alpha-helical ferredoxin b2979 b2979 55103 FAD-linked oxidases, C-terminal domain b2979 b2979 56176 FAD-binding domain b2980 b2980 46785 Winged helix DNA-binding domain b2981 b2981 55729 Acyl-CoA N-acyltransferases (Nat) b2984 b2984 52540 P-loop containing nucleoside triphosphate hydrolases b2985 b2985 52540 P-loop containing nucleoside triphosphate hydrolases b2986 b2986 52540 P-loop containing nucleoside triphosphate hydrolases b2987 b2987 81540 Subunit VIII of photosystem I reaction centre, PsaI b2993 b2993 53163 HybD-like b2994 b2994 56762 Nickel-iron hydrogenase, large subunit b2996 b2996 54862 4Fe-4S ferredoxins b2997 b2997 56770 Nickel-iron hydrogenase, small subunit b3001 b3001 51430 NAD(P)-linked oxidoreductase b3002 b3002 81340 Clc chloride channel b3003 b3003 51735 NAD(P)-binding Rossmann-fold domains b3005 b3005 55331 Tautomerase/MIF b3008 b3008 53383 PLP-dependent transferases b3010 b3010 46689 Homeodomain-like b3011 b3011 56796 Dehydroquinate synthase-like b3017 b3017 49503 Cupredoxins b3019 b3019 56719 Type II DNA topoisomerase b3020 b3020 53850 Periplasmic binding protein-like II b3021 b3021 47413 lambda repressor-like DNA-binding domains b3023 b3023 55136 Probable bacterial effector-binding domain b3025 b3025 52172 CheY-like b3026 b3026 47384 Homodimeric domain of signal transducing histidine kinase b3026 b3026 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b3028 b3028 52218 Flavoproteins b3029 b3029 54909 Dimeric alpha+beta barrel b3030 b3030 54211 Ribosomal protein S5 domain 2-like b3030 b3030 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b3030 b3030 56719 Type II DNA topoisomerase b3031 b3031 53474 alpha/beta-Hydrolases b3032 b3032 56300 Metallo-dependent phosphatases b3034 b3034 55811 Nudix b3035 b3035 56954 Integral outer membrane protein TolC, efflux pump component b3039 b3039 53213 LigB subunit of an aromatic-ring-opening dioxygenase LigAB b3041 b3041 55821 YrdC/RibB b3043 b3043 49401 Bacterial adhesins b3044 b3044 46689 Homeodomain-like b3045 b3045 53098 Ribonuclease H-like b3048 b3048 49401 Bacterial adhesins b3052 b3052_1 53613 Ribokinase-like b3052 b3052_2 52374 Nucleotidylyl transferase b3056 b3056 81301 Nucleotidyltransferase b3056 b3056 81891 tRNA CCA-adding enzyme, C-terminal domains b3058 b3058 55620 Tetrahydrobiopterin biosynthesis enzymes-like b3060 b3060 46785 Winged helix DNA-binding domain b3060 b3060 53850 Periplasmic binding protein-like II b3064 b3064 53067 Actin-like ATPase domain b3066 b3066 56731 DNA primase core b3066 b3066 57783 Zinc beta-ribbon b3067 b3067 46894 C-terminal effector domain of the bipartite response regulators b3067 b3067 48329 b3068 b3068 52141 DNA glycosylase b3070 b3070 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain b3070 b3070 63380 Riboflavin synthase domain-like b3071 b3071 46785 Winged helix DNA-binding domain b3072 b3072_1 55785 PYP-like sensor domain (PAS domain) b3074 b3074 50249 Nucleic acid-binding proteins b3075 b3075 47413 lambda repressor-like DNA-binding domains b3075 b3075 53822 Periplasmic binding protein-like I b3080 b3080 48208 Six-hairpin glycosyltransferases b3081 b3081 51395 FMN-linked oxidoreductases b3081 b3081 51971 Nucleotide-binding domain b3082 b3082 47413 lambda repressor-like DNA-binding domains b3087 b3087 51735 NAD(P)-binding Rossmann-fold domains b3092 b3092 51556 Metallo-dependent hydrolases b3094 b3094 46785 Winged helix DNA-binding domain b3102 b3102 47616 Glutathione S-transferase (GST), C-terminal domain b3102 b3102 52833 Thioredoxin-like b3105 b3105 46785 Winged helix DNA-binding domain b3105 b3105 53850 Periplasmic binding protein-like II b3106 b3106 51182 RmlC-like cupins b3114 b3114 51998 PFL-like glycyl radical enzymes b3115 b3115 53067 Actin-like ATPase domain b3117 b3117 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes b3118 b3118 46785 Winged helix DNA-binding domain b3118 b3118 53850 Periplasmic binding protein-like II b3125 b3125 51735 NAD(P)-binding Rossmann-fold domains b3126 b3126 51621 Phosphoenolpyruvate/pyruvate domain b3129 b3129 54742 Transcription-state regulator AbrB, the N-terminal DNA recognition domain b3131 b3131 46785 Winged helix DNA-binding domain b3131 b3131 52512 Phosphosugar isomerase b3135 b3135 51338 Composite domain of metallo-dependent hydrolases b3135 b3135 51556 Metallo-dependent hydrolases b3136 b3136 53697 SIS domain b3137 b3137 51569 Aldolase b3138 b3138 52728 PTS IIb component b3141 b3141 52512 Phosphosugar isomerase b3142 b3142 49401 Bacterial adhesins b3143 b3143 49354 PapD-like b3143 b3143 49584 Periplasmic chaperone C-domain b3145 b3145 49401 Bacterial adhesins b3146 b3146 53790 Cobalt precorrin-4 methyltransferase CbiF b3147 b3147 48452 TPR-like b3147 b3147 53822 Periplasmic binding protein-like I b3148 b3148 52980 Restriction endonuclease-like b3149 b3149 53697 SIS domain b3152 b3152 51735 NAD(P)-binding Rossmann-fold domains b3153 b3153 52317 Class I glutamine amidotransferase-like b3155 b3155 82771 GIY-YIG endonuclease b3156 b3156 55729 Acyl-CoA N-acyltransferases (Nat) b3157 b3157 55718 Sterol carrier protein, SCP b3158 b3158 51621 Phosphoenolpyruvate/pyruvate domain b3160 b3160 51679 Bacterial luciferase-like b3162 b3162 52540 P-loop containing nucleoside triphosphate hydrolases b3163 b3163 48439 Protein prenylyltransferase b3165 b3165 47060 S15/NS1 RNA-binding domain b3166 b3166 55120 Pseudouridine synthase b3168 b3168_2 50447 Translation proteins b3168 b3168_2 52156 Initiation factor IF2/eIF5b, domain 3 b3168 b3168_2 52540 P-loop containing nucleoside triphosphate hydrolases b3169 b3169 47794 DNA repair protein Rad51, N-terminal domain b3169 b3169 50249 Nucleic acid-binding proteins b3169 b3169 54814 Prokaryotic type KH domain (KH-domain type II) b3169 b3169 69705 Transcription factor NusA, N-terminal domain b3172 b3172 52402 Adenine nucleotide alpha hydrolases-like b3172 b3172 69864 Argininosuccinate synthetase, C-terminal domain b3176 b3176 53738 Phosphoglucomutase, first 3 domains b3176 b3176 55957 Phosphoglucomutase, C-terminal domain b3178 b3178 52540 P-loop containing nucleoside triphosphate hydrolases b3179 b3179 53335 S-adenosyl-L-methionine-dependent methyltransferases b3180 b3180 75471 YhbY-like b3182 b3182 56601 beta-lactamase/transpeptidase-like b3183 b3183 52540 P-loop containing nucleoside triphosphate hydrolases b3183 b3183 82051 Obg GTP-binding protein N-terminal domain b3187 b3187 48576 Terpenoid synthases b3188 b3188 47413 lambda repressor-like DNA-binding domains b3189 b3189 55205 EPT/RTPC-like b3190 b3190 82657 BolA-like b3195 b3195 53795 PEP carboxykinase-like b3197 b3197 53697 SIS domain b3198 b3198 56784 HAD-like b3201 b3201 53795 PEP carboxykinase-like b3203 b3203 69754 Ribosome binding protein Y (YfiA homologue) b3204 b3204 55804 Phoshotransferase/anion transport protein b3205 b3205 52540 P-loop containing nucleoside triphosphate hydrolases b3206 b3206 55594 HPr-like b3207 b3207 56112 Protein kinase-like (PK-like) b3209 b3209 52317 Class I glutamine amidotransferase-like b3210 b3210_1 47384 Homodimeric domain of signal transducing histidine kinase b3210 b3210_1 55785 PYP-like sensor domain (PAS domain) b3210 b3210_1 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b3210 b3210_2 47226 Histidine-containing phosphotransfer domain, HPT domain b3210 b3210_2 52172 CheY-like b3212 b3212 51395 FMN-linked oxidoreductases b3212 b3212 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases) b3212 b3212 69336 Alpha subunit of glutamate synthase, C-terminal domain b3213 b3213 46548 alpha-helical ferredoxin b3213 b3213 51971 Nucleotide-binding domain b3215 b3215 49354 PapD-like b3215 b3215 49584 Periplasmic chaperone C-domain b3223 b3223 51366 Ribulose-phoshate binding barrel b3225 b3225 51569 Aldolase b3229 b3229 47616 Glutathione S-transferase (GST), C-terminal domain b3229 b3229 52833 Thioredoxin-like b3230 b3230 54211 Ribosomal protein S5 domain 2-like b3231 b3231 52161 Ribosomal protein L13 b3232 b3232 52540 P-loop containing nucleoside triphosphate hydrolases b3234 b3234 50156 PDZ domain-like b3234 b3234 50494 Trypsin-like serine proteases b3235 b3235 50156 PDZ domain-like b3235 b3235 50494 Trypsin-like serine proteases b3236 b3236 51735 NAD(P)-binding Rossmann-fold domains b3236 b3236 56327 LDH C-terminal domain-like b3237 b3237 46785 Winged helix DNA-binding domain b3237 b3237 55252 C-terminal domain of arginine repressor b3239 b3239 52038 Barstar (barnase inhibitor) b3241 b3241 51230 Single hybrid motif b3243 b3243 46785 Winged helix DNA-binding domain b3243 b3243 53850 Periplasmic binding protein-like II b3247 b3247 50249 Nucleic acid-binding proteins b3248 b3248 52972 Maf/Ham1 b3251 b3251 53067 Actin-like ATPase domain b3253 b3253 50129 GroES-like b3253 b3253 51735 NAD(P)-binding Rossmann-fold domains b3255 b3255 51230 Single hybrid motif b3256 b3256 51246 Rudiment single hybrid motif b3256 b3256 52440 PreATP-grasp domain b3256 b3256 56059 Glutathione synthetase ATP-binding domain-like b3259 b3259 53335 S-adenosyl-L-methionine-dependent methyltransferases b3260 b3260 51395 FMN-linked oxidoreductases b3261 b3261 48283 FIS-like b3264 b3264 46689 Homeodomain-like b3264 b3264 46785 Winged helix DNA-binding domain b3265 b3265 51230 Single hybrid motif b3266 b3266 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains b3266 b3266 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains b3266 b3266 82866 Multidrug efflux transporter AcrB transmembrane domain b3271 b3271 53795 PEP carboxykinase-like b3281 b3281 51735 NAD(P)-binding Rossmann-fold domains b3281 b3281 53223 Aminoacid dehydrogenase-like, N-terminal domain b3282 b3282 55821 YrdC/RibB b3283 b3283 57783 Zinc beta-ribbon b3287 b3287 56420 Peptide deformylase b3288 b3288 50486 FMT C-terminal domain-like b3288 b3288 53328 Formyltransferase b3289 b3289 48013 Antitermination factor NusB b3289 b3289 53335 S-adenosyl-L-methionine-dependent methyltransferases b3290 b3290 51735 NAD(P)-binding Rossmann-fold domains b3291 b3291 81330 Gated mechanosensitive channel b3292 b3292 46955 Putative DNA-binding domain b3294 b3294 64263 Prokaryotic ribosomal protein L17 b3295 b3295 47789 C-terminal domain of RNA polymerase alpha subunit b3295 b3295 55257 RBP11-like subunits of RNA polymerase b3295 b3295 56553 Insert subdomain of RNA polymerase alpha subunit b3296 b3296 55174 Alpha-L RNA-binding motif b3297 b3297 53137 Translational machinery components b3298 b3298 46946 S13-like H2TH domain b3299 b3299 57840 Ribosomal protein L36 b3301 b3301 52080 Ribosomal proteins L15p and L18e b3302 b3302 55129 Ribosomal protein L30p/L7e b3303 b3303 54211 Ribosomal protein S5 domain 2-like b3303 b3303 54768 dsRNA-binding domain-like b3304 b3304 53137 Translational machinery components b3305 b3305 56053 Ribosomal protein L6 b3306 b3306 56047 Ribosomal protein S8 b3307 b3307 57716 Glucocorticoid receptor-like (DNA-binding domain) b3308 b3308 55282 Ribosomal protein L5 b3309 b3309 50104 Translation proteins SH3-like domain b3310 b3310 50193 Ribosomal protein L14 b3311 b3311 50249 Nucleic acid-binding proteins b3312 b3312 46561 Ribosomal protein L29 (L29p) b3313 b3313 54686 Ribosomal protein L10e b3314 b3314 54814 Prokaryotic type KH domain (KH-domain type II) b3314 b3314 54821 Ribosomal protein S3 C-terminal domain b3315 b3315 54843 Ribosomal protein L22 b3316 b3316 54570 Ribosomal protein S19 b3317 b3317 50104 Translation proteins SH3-like domain b3317 b3317 50249 Nucleic acid-binding proteins b3318 b3318 54189 Ribosomal proteins L23 and L15e b3319 b3319 52166 Ribosomal protein L4 b3320 b3320 50447 Translation proteins b3321 b3321 54999 Ribosomal protein S10 b3323 b3323 47090 PGBD-like b3323 b3323 52540 P-loop containing nucleoside triphosphate hydrolases b3324 b3324 50156 PDZ domain-like b3326 b3326 52540 P-loop containing nucleoside triphosphate hydrolases b3328 b3328 54523 Pili subunits b3329 b3329 54523 Pili subunits b3331 b3331 54523 Pili subunits b3336 b3336 47240 Ferritin-like b3338 b3338 51055 Carbohydrate binding domain b3338 b3338 51445 (Trans)glycosidases b3339 b3339 50447 Translation proteins b3339 b3339 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain b3339 b3339 52540 P-loop containing nucleoside triphosphate hydrolases b3340 b3340 50447 Translation proteins b3340 b3340 52540 P-loop containing nucleoside triphosphate hydrolases b3340 b3340 54211 Ribosomal protein S5 domain 2-like b3340 b3340 54980 EF-G/eEF-2 domains III and V b3341 b3341 47973 Ribosomal protein S7 b3342 b3342 50249 Nucleic acid-binding proteins b3344 b3344 75169 YchN-like b3345 b3345 75169 YchN-like b3347 b3347 54534 FKBP-like b3349 b3349 54534 FKBP-like b3350 b3350 51735 NAD(P)-binding Rossmann-fold domains b3351 b3351 52218 Flavoproteins b3352 b3352_1 52540 P-loop containing nucleoside triphosphate hydrolases b3352 b3352_2 52540 P-loop containing nucleoside triphosphate hydrolases b3353 b3353 53474 alpha/beta-Hydrolases b3355 b3355 52540 P-loop containing nucleoside triphosphate hydrolases b3356 b3356 82784 OsmC-like b3357 b3357 46785 Winged helix DNA-binding domain b3357 b3357 51206 cAMP-binding domain-like b3359 b3359 53383 PLP-dependent transferases b3360 b3360 52317 Class I glutamine amidotransferase-like b3363 b3363 50891 Cyclophilin (peptidylprolyl isomerase) b3365 b3365 51905 FAD/NAD(P)-binding domain b3365 b3365 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain b3365 b3365 56014 Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 b3366 b3366 50022 ISP domain b3368 b3368_1 51735 NAD(P)-binding Rossmann-fold domains b3368 b3368_2 53790 Cobalt precorrin-4 methyltransferase CbiF b3371 b3371 53697 SIS domain b3373 b3373 51658 Xylose isomerase-like b3374 b3374 53613 Ribokinase-like b3376 b3376 53383 PLP-dependent transferases b3379 b3379 51556 Metallo-dependent hydrolases b3380 b3380 53649 Alkaline phosphatase-like b3381 b3381 51419 PLP-binding barrel b3382 b3382 63520 PTS-regulatory domain, PRD b3383 b3383 53850 Periplasmic binding protein-like II b3384 b3384 52374 Nucleotidylyl transferase b3385 b3385 56784 HAD-like b3386 b3386 51366 Ribulose-phoshate binding barrel b3387 b3387 53335 S-adenosyl-L-methionine-dependent methyltransferases b3389 b3389 56796 Dehydroquinate synthase-like b3390 b3390 52540 P-loop containing nucleoside triphosphate hydrolases b3396 b3396_2 56601 beta-lactamase/transpeptidase-like b3397 b3397 55811 Nudix b3398 b3398 46626 Cytochrome c b3400 b3400 55174 Alpha-L RNA-binding motif b3401 b3401 64397 Hsp33 domain b3403 b3403 53795 PEP carboxykinase-like b3403 b3403 68923 PEP carboxykinase N-terminal domain b3404 b3404 47384 Homodimeric domain of signal transducing histidine kinase b3404 b3404 50447 Translation proteins b3404 b3404 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase b3405 b3405 52172 CheY-like b3406 b3406 54001 Cysteine proteinases b3408 b3408 50037 C-terminal domain of transcriptional repressors b3409 b3409_1 52540 P-loop containing nucleoside triphosphate hydrolases b3409 b3409_2 52540 P-loop containing nucleoside triphosphate hydrolases b3410 b3410 46785 Winged helix DNA-binding domain b3412 b3412 53474 alpha/beta-Hydrolases b3413 b3413 53271 PRTase-like b3416 b3416 51445 (Trans)glycosidases b3417 b3417 53756 UDP-Glycosyltransferase/glycogen phosphorylase b3418 b3418_1 48452 TPR-like b3418 b3418_1 52540 P-loop containing nucleoside triphosphate hydrolases b3418 b3418_2 46894 C-terminal effector domain of the bipartite response regulators b3419 b3419 52913 RNA 3'-terminal phosphate cyclase, RPTC, insert domain b3419 b3419 55205 EPT/RTPC-like b3422 b3422 52540 P-loop containing nucleoside triphosphate hydrolases b3423 b3423 46785 Winged helix DNA-binding domain b3423 b3423 52512 Phosphosugar isomerase b3425 b3425 52821 Rhodanese/Cell cycle control phosphatase b3426 b3426 51905 FAD/NAD(P)-binding domain b3426 b3426 54373 FAD-linked reductases, C-terminal domain b3429 b3429 53756 UDP-Glycosyltransferase/glycogen phosphorylase b3430 b3430 53448 Nucleotide-diphospho-sugar transferases b3431 b3431 51011 Glycosyl hydrolase domain b3431 b3431 51445 (Trans)glycosidases b3431 b3431 81296 E set domains b3432 b3432 51011 Glycosyl hydrolase domain b3432 b3432 51445 (Trans)glycosidases b3432 b3432 81296 E set domains b3433 b3433 51735 NAD(P)-binding Rossmann-fold domains b3433 b3433 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain b3437 b3437 52540 P-loop containing nucleoside triphosphate hydrolases b3438 b3438 47413 lambda repressor-like DNA-binding domains b3438 b3438 53822 Periplasmic binding protein-like I b3439 b3439 51182 RmlC-like cupins b3440 b3440 51735 NAD(P)-binding Rossmann-fold domains b3441 b3441 55729 Acyl-CoA N-acyltransferases (Nat) b3442 b3442 54060 His-Me finger endonucleases b3444 b3444 46689 Homeodomain-like b3449 b3449 51695 PLC-like phosphodiesterases b3450 b3450 50331 MOP-like b3450 b3450 53795 PEP carboxykinase-like b3453 b3453 53850 Periplasmic binding protein-like II b3455 b3455 53795 PEP carboxykinase-like b3456 b3456 56854 Bcl-2 inhibitors of programmed cell death b3457 b3457 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain b3458 b3458 53822 Periplasmic binding protein-like I b3459 b3459 55729 Acyl-CoA N-acyltransferases (Nat) b3461 b3461 48329 b3463 b3463 53795 PEP carboxykinase-like b3464 b3464_2 47364 Domain of the SRP/SRP receptor G-proteins b3464 b3464_2 52540 P-loop containing nucleoside triphosphate hydrolases b3465 b3465 53335 S-adenosyl-L-methionine-dependent methyltransferases b3469 b3469 55008 Metal-binding domain b3469 b3469 56784 HAD-like b3469 b3469 81653 Calcium ATPase, transduction domain A b3469 b3469 81665 Calcium ATPase, transmembrane domain M b3470 b3470 64307 SirA-like b3475 b3475 56214 4'-phosphopantetheinyl transferase b3476 b3476 53850 Periplasmic binding protein-like II b3479 b3479 53795 PEP carboxykinase-like b3480 b3480 53795 PEP carboxykinase-like b3481 b3481 47598 Met repressor-like b3486 b3486_1 52540 P-loop containing nucleoside triphosphate hydrolases b3486 b3486_2 52540 P-loop containing nucleoside triphosphate hydrolases b3487 b3487 51230 Single hybrid motif b3487 b3487 51261 Duplicat